RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PDLIM7Q9NR12 457 aa14.86□□□□□ -0.03
CLK4-210ENST00000522136 TRIP12Q14669 1992 aaPredicted RBP14.86□□□□□ -0.03
CLK4-210ENST00000522136 ZEB2O60315 1214 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 GUCY2CP25092 1073 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 CST5P28325 142 aaPredicted RBP14.85□□□□□ -0.03
CLK4-210ENST00000522136 POLGP54098 1239 aaPredicted RBP14.85□□□□□ -0.03
CLK4-210ENST00000522136 TYRO3Q06418 890 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 MAPK7Q13164 816 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 UNC13DQ70J99 1090 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 RNF180Q86T96 592 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 FUCA2Q9BTY2 467 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 SETD4Q9NVD3 440 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 TBC1D7Q9P0N9 293 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 SCN10AQ9Y5Y9 1956 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 KPNA6O60684 536 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 SMIM10L2AP0DMW4 78 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 SMIM10L2BP0DMW5 78 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 COASYQ13057 564 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 HIC1Q14526 733 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 FAM102BQ5T8I3 360 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 SMYD4Q8IYR2 804 aaPredicted RBP14.85□□□□□ -0.03
CLK4-210ENST00000522136 ZNF333Q96JL9 665 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 MTG1Q9BT17 334 aaPredicted RBP14.85□□□□□ -0.03
CLK4-210ENST00000522136 DHX33Q9H6R0 707 aaKnown RBP14.85□□□□□ -0.03
CLK4-210ENST00000522136 EXOC1Q9NV70 894 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 KCND2Q9NZV8 630 aa14.85□□□□□ -0.03
CLK4-210ENST00000522136 PVALEFA0A1B0GWK0 134 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 DGAT1O75907 488 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 FAM13AO94988 1023 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 KLRC1P26715 233 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 ZNF445P59923 1031 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 TBC1D8BQ0IIM8 1120 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 PPFIA1Q13136 1202 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 DRP2Q13474 957 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 MORC3Q14149 939 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 EMC2Q15006 297 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 GRIK4Q16099 956 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 HERC4Q5GLZ8 1057 aaPredicted RBP14.84□□□□□ -0.03
CLK4-210ENST00000522136 ZNF484Q5JVG2 852 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 CCDC65Q8IXS2 484 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 TMEM143Q96AN5 459 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 ATP6V0A4Q9HBG4 840 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 GDAQ9Y2T3 454 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 FRMD3A2A2Y4 597 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 TBCAO75347 108 aaKnown RBP14.84□□□□□ -0.03
CLK4-210ENST00000522136 RHOBTB3O94955 611 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 ACLYP53396 1101 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 KCNB1Q14721 858 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 NBPF20Q3BBV1 942 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 DPCR1Q3MIW9 517 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 MARCH8Q5T0T0 291 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 LRSAM1Q6UWE0 723 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 SFR1Q86XK3 245 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 LRRC71Q8N4P6 559 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 PCSK9Q8NBP7 692 aaKnown RBP14.84□□□□□ -0.03
CLK4-210ENST00000522136 GLIS3Q8NEA6 775 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 SLC7A3Q8WY07 619 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 FGFBP2Q9BYJ0 223 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 SUGCTQ9HAC7 445 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 SLC39A2Q9NP94 309 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 HDAC6Q9UBN7 1215 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 ODF2LQ9ULJ1 636 aa14.84□□□□□ -0.03
CLK4-210ENST00000522136 MAFO75444 373 aaPredicted RBP14.83□□□□□ -0.04
CLK4-210ENST00000522136 C22orf31O95567 290 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 CCDC192P0DO97 292 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 RFC5P40937 340 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 NLRP12P59046 1061 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 ZNF200P98182 395 aaPredicted RBP14.83□□□□□ -0.04
CLK4-210ENST00000522136 EHHADHQ08426 723 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 STK4Q13043 487 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.04
CLK4-210ENST00000522136 MYCT1Q8N699 235 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 LMBR1Q8WVP7 490 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 ARMC5Q96C12 935 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 KATNAL1Q9BW62 490 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 RMND1Q9NWS8 449 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 MAPK8IP1Q9UQF2 711 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 COL4A3BPQ9Y5P4 624 aa14.83□□□□□ -0.04
CLK4-210ENST00000522136 EFCAB12Q6NXP0 572 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 C11orf57Q6ZUT1 292 aaPredicted RBP14.82□□□□□ -0.04
CLK4-210ENST00000522136 METTL13Q8N6R0 699 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 ARRDC4Q8NCT1 418 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 MCPH1Q8NEM0 835 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 BSNDQ8WZ55 320 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 CCDC47Q96A33 483 aaKnown RBP14.82□□□□□ -0.04
CLK4-210ENST00000522136 VTI1AQ96AJ9 217 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 POLR3FQ9H1D9 316 aaPredicted RBP14.82□□□□□ -0.04
CLK4-210ENST00000522136 PARVGQ9HBI0 331 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 PRDM10Q9NQV6 1147 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 GRIN2DO15399 1336 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 IGKV6-21A0A0C4DH24 114 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 COL1A2P08123 1366 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
CLK4-210ENST00000522136 BRCA2P51587 3418 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 CLCN3P51790 818 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 ZNF131P52739 623 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 STX1AQ16623 288 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 ODR4Q5SWX8 454 aa14.82□□□□□ -0.04
CLK4-210ENST00000522136 ZNF658Q5TYW1 1059 aaPredicted RBP14.82□□□□□ -0.04
CLK4-210ENST00000522136 MTHFD1LQ6UB35 978 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms