RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SFR1Q86XK3 245 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 FAM200AQ8TCP9 573 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 ATP6V0A4Q9HBG4 840 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 PARVGQ9HBI0 331 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 CBX8Q9HC52 389 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 MAPK8IP1Q9UQF2 711 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 PTPN22Q9Y2R2 807 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 PGK1P00558 417 aa23.68■■□□□ 1.38
R3HCC1-208ENST00000522012 CD44P16070 742 aaKnown RBP23.68■■□□□ 1.38
R3HCC1-208ENST00000522012 CHMP4BP1P59074 171 aa23.68■■□□□ 1.38
R3HCC1-208ENST00000522012 KLHL10Q6JEL2 608 aa23.68■■□□□ 1.38
R3HCC1-208ENST00000522012 XPNPEP3Q9NQH7 507 aa23.68■■□□□ 1.38
R3HCC1-208ENST00000522012 SYNRGQ9UMZ2 1314 aa23.68■■□□□ 1.38
R3HCC1-208ENST00000522012 CASP8AP2Q9UKL3 1982 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 PPP1R3GB7ZBB8 358 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 RFC5P40937 340 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 PRCPP42785 496 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 MAPK7Q13164 816 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 GNASQ5JWF2 1037 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 DAW1Q8N136 415 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 MCPH1Q8NEM0 835 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 SH3TC2Q8TF17 1288 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 SLC7A3Q8WY07 619 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 DRC1Q96MC2 740 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 UPF3AQ9H1J1 476 aaKnown RBP23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 GPRC5CQ9NQ84 441 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 PDLIM7Q9NR12 457 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 DDX20Q9UHI6 824 aaKnown RBP23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 PPME1Q9Y570 386 aa23.67■■□□□ 1.38
R3HCC1-208ENST00000522012 MYADML2A6NDP7 307 aa23.66■■□□□ 1.38
R3HCC1-208ENST00000522012 ZNF131P52739 623 aa23.66■■□□□ 1.38
R3HCC1-208ENST00000522012 STIM1Q13586 685 aa23.66■■□□□ 1.38
R3HCC1-208ENST00000522012 EMC2Q15006 297 aa23.66■■□□□ 1.38
R3HCC1-208ENST00000522012 KIAA0895Q8NCT3 520 aa23.66■■□□□ 1.38
R3HCC1-208ENST00000522012 CEP89Q96ST8 783 aa23.66■■□□□ 1.38
R3HCC1-208ENST00000522012 HMX1Q9NP08 348 aaPredicted RBP23.66■■□□□ 1.38
R3HCC1-208ENST00000522012 FSD2A1L4K1 749 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 MYCNP04198 464 aaPredicted RBP23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 INSRRP14616 1297 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 SOX10P56693 466 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 TBC1D8BQ0IIM8 1120 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 LRRC41Q15345 812 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 ZNF484Q5JVG2 852 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 ODR4Q5SWX8 454 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 LUZP1Q86V48 1076 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 ADSSL1Q8N142 457 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 TRAPPC12Q8WVT3 735 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 DHX33Q9H6R0 707 aaKnown RBP23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 MRPL44Q9H9J2 332 aaKnown RBP23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 XPNPEP1Q9NQW7 623 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 PCDHA2Q9Y5H9 948 aa23.65■■□□□ 1.38
R3HCC1-208ENST00000522012 ZBTB42B2RXF5 422 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 ZEB2O60315 1214 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 KPNA6O60684 536 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 F2P00734 622 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 IGBP1P78318 339 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 L1TD1Q5T7N2 865 aaKnown RBP23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 GLIS3Q8NEA6 775 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 KAT2BQ92831 832 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 KIFAP3Q92845 792 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 BPIFA3Q9BQP9 254 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 FGFBP2Q9BYJ0 223 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 SEL1LQ9UBV2 794 aa23.64■■□□□ 1.38
R3HCC1-208ENST00000522012 BECN2A8MW95 431 aa23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 MAFO75444 373 aaPredicted RBP23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 PLS3P13797 630 aa23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 MFSD10Q14728 455 aa23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 KIAA0753Q2KHM9 967 aa23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 CT47A1Q5JQC4 288 aaPredicted RBP23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 EXOC8Q8IYI6 725 aa23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 AOPEPQ8N6M6 819 aa23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 TMEM143Q96AN5 459 aa23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 LARSQ9P2J5 1176 aaKnown RBP23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 CTNND2Q9UQB3 1225 aa23.64■■□□□ 1.37
R3HCC1-208ENST00000522012 ADAMTS4O75173 837 aa23.63■■□□□ 1.37
R3HCC1-208ENST00000522012 ERCC5P28715 1186 aaPredicted RBP23.63■■□□□ 1.37
R3HCC1-208ENST00000522012 PSEN2P49810 448 aa23.63■■□□□ 1.37
R3HCC1-208ENST00000522012 NKX3-2P78367 333 aa23.63■■□□□ 1.37
R3HCC1-208ENST00000522012 PURAQ00577 322 aaKnown RBP23.63■■□□□ 1.37
R3HCC1-208ENST00000522012 IQCB1Q15051 598 aa23.63■■□□□ 1.37
R3HCC1-208ENST00000522012 FAM178BQ8IXR5 827 aa23.63■■□□□ 1.37
R3HCC1-208ENST00000522012 POLR3FQ9H1D9 316 aaPredicted RBP23.63■■□□□ 1.37
R3HCC1-208ENST00000522012 OLFML3Q9NRN5 406 aa23.63■■□□□ 1.37
R3HCC1-208ENST00000522012 PSMA7O14818 248 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 MSCO60682 206 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 PPP1R2P41236 205 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 STX17P56962 302 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 PPFIA1Q13136 1202 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 PAK1Q13153 545 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 COBLL1Q53SF7 1204 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 DHX40Q8IX18 779 aaKnown RBP23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 MYOCDQ8IZQ8 938 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 NELFBQ8WX92 580 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 KATNAL1Q9BW62 490 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 SUGCTQ9HAC7 445 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 GRPEL1Q9HAV7 217 aa23.62■■□□□ 1.37
R3HCC1-208ENST00000522012 SMTNL1A8MU46 457 aa23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 GCNT3O95395 438 aa23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 MYBP10242 640 aa23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 NMT1P30419 496 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms