RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 GNAT1P11488 350 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 HSD17B4P51659 736 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 CES5AQ6NT32 575 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 RNF19BQ6ZMZ0 732 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 COLGALT1Q8NBJ5 622 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 DNAJB3Q8WWF6 145 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 GPR20Q99678 358 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 TCF25Q9BQ70 676 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 USP26Q9BXU7 913 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 CYP26B1Q9NR63 512 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 SH2B1Q9NRF2 756 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 PADI3Q9ULW8 664 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 LZTS1Q9Y250 596 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 CDY2AQ9Y6F7 541 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 SMG1Q96Q15 3661 aaKnown RBP10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 ASH1LQ9NR48 2969 aaKnown RBP10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 MBLAC1A4D2B0 266 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 ORC4O43929 436 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 MGEA5O60502 916 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 CLASP2O75122 1294 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 SLC3A2P08195 630 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 SRGAP2BP0DMP2 458 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 TGFB3P10600 412 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 HSPD1P10809 573 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 MYCLP12524 364 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 SCG2P13521 617 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 MTHFRP42898 656 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 PLCB3Q01970 1234 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 GHRHRQ02643 423 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 CDC37Q16543 378 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 RARS2Q5T160 578 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 TAF2Q6P1X5 1199 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 KCNV1Q6PIU1 500 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 LRRC55Q6ZSA7 311 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 STOX1Q6ZVD7 989 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 C1orf210Q8IVY1 113 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 THNSL1Q8IYQ7 743 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 MRPL43Q8N983 215 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 MRPS27Q92552 414 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 CASP10Q92851 521 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 RTKNQ9BST9 563 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 NAPBQ9H115 298 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 MLXIPQ9HAP2 919 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 PARD6AQ9NPB6 346 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 FBXL21Q9UKT6 434 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 WDFY3Q8IZQ1 3526 aa10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 HELZ2Q9BYK8 2649 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-212ENST00000521944 ABCB11O95342 1321 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 NRCAMQ92823 1304 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 C2orf71A6NGG8 1288 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 TBKBP1A7MCY6 615 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 RNF223E7ERA6 249 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 SPTLC1O15269 473 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 N4BP1O75113 896 aaKnown RBP10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 STAG3L1P0CL83 205 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 SDHBP21912 280 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 PBX3P40426 434 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 GUCA2AQ02747 115 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 TBC1D8BQ0IIM8 1120 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 PGM5Q15124 567 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 SPECC1Q5M775 1068 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 TSHZ3Q63HK5 1081 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 KIAA1841Q6NSI8 718 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 ZC3H14Q6PJT7 736 aaKnown RBP10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 MCF2L2Q86YR7 1114 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 RSAD2Q8WXG1 361 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 FTHL17Q9BXU8 183 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 TBC1D17Q9HA65 648 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 NGRNQ9NPE2 291 aaKnown RBP10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 TCP11L1Q9NUJ3 509 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 WNT16Q9UBV4 365 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 ANAPC4Q9UJX5 808 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 CDV3Q9UKY7 258 aaKnown RBP10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 DOCK5Q9H7D0 1870 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 LOXHD1Q8IVV2 1947 aa10.33□□□□□ -0.76
TRAPPC9-212ENST00000521944 DENND4AQ7Z401 1863 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 PRR5-ARHGAP8B1AHC4 643 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 SMARCA5O60264 1052 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 RAB11FIP3O75154 756 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 LRRN2O75325 713 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 CFBP00751 764 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 NDUFV2P19404 249 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 SARSP49591 514 aaKnown RBP10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 MRPS6P82932 125 aaKnown RBP10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 ARHGAP8P85298 464 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 QRICH1Q2TAL8 776 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 PPM1JQ5JR12 505 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 ATAT1Q5SQI0 421 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 UTP14CQ5TAP6 766 aaKnown RBP10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 METTL7BQ6UX53 244 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 CYFIP1Q7L576 1253 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 ADGRF4Q8IZF3 695 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 NACAP1Q9BZK3 213 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 ENTPD7Q9NQZ7 604 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 DBR1Q9UK59 544 aaKnown RBP10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 SQORQ9Y6N5 450 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms