RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 INHAP05111 366 aa16.68■□□□□ 0.26
SREK1-209ENST00000520953 GUCY2CP25092 1073 aa16.68■□□□□ 0.26
SREK1-209ENST00000520953 PMS1P54277 932 aaKnown RBP16.68■□□□□ 0.26
SREK1-209ENST00000520953 DRP2Q13474 957 aa16.68■□□□□ 0.26
SREK1-209ENST00000520953 TARBP2Q15633 366 aaKnown RBP16.68■□□□□ 0.26
SREK1-209ENST00000520953 FAM102BQ5T8I3 360 aa16.68■□□□□ 0.26
SREK1-209ENST00000520953 MAP3K21Q5TCX8 1036 aa16.68■□□□□ 0.26
SREK1-209ENST00000520953 ATP8B4Q8TF62 1192 aa16.68■□□□□ 0.26
SREK1-209ENST00000520953 NIFKQ9BYG3 293 aaKnown RBP16.68■□□□□ 0.26
SREK1-209ENST00000520953 IKZF4Q9H2S9 585 aa16.68■□□□□ 0.26
SREK1-209ENST00000520953 CTNND2Q9UQB3 1225 aa16.68■□□□□ 0.26
SREK1-209ENST00000520953 TRPC6Q9Y210 931 aa16.68■□□□□ 0.26
SREK1-209ENST00000520953 SEPT4O43236 478 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 DKC1O60832 514 aaKnown RBP eCLIP16.67■□□□□ 0.26
SREK1-209ENST00000520953 TBCAO75347 108 aaKnown RBP16.67■□□□□ 0.26
SREK1-209ENST00000520953 MYCP01106 439 aaPredicted RBP16.67■□□□□ 0.26
SREK1-209ENST00000520953 FAM26FQ5R3K3 315 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 KSR1Q8IVT5 923 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 CCDC65Q8IXS2 484 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 MLKLQ8NB16 471 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 BSNDQ8WZ55 320 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 KAT2BQ92831 832 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 FIZ1Q96SL8 496 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 PDLIM7Q9NR12 457 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 MYH11P35749 1972 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 TRIM49BA6NDI0 452 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 FAM13AO94988 1023 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
SREK1-209ENST00000520953 C6orf222P0C671 652 aaPredicted RBP16.67■□□□□ 0.26
SREK1-209ENST00000520953 MYBP10242 640 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 NMT1P30419 496 aaKnown RBP16.67■□□□□ 0.26
SREK1-209ENST00000520953 IGBP1P78318 339 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 NCAPHQ15003 741 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 FSCN1Q16658 493 aaKnown RBP16.67■□□□□ 0.26
SREK1-209ENST00000520953 DGKDQ16760 1214 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 ADSSL1Q8N142 457 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 MYCT1Q8N699 235 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 TMEM143Q96AN5 459 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 ERAP1Q9NZ08 941 aa16.67■□□□□ 0.26
SREK1-209ENST00000520953 H3BRB1 525 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 DUSP11O75319 330 aaKnown RBP16.66■□□□□ 0.26
SREK1-209ENST00000520953 GNRH1P01148 92 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 MYCNP04198 464 aaPredicted RBP16.66■□□□□ 0.26
SREK1-209ENST00000520953 MYL3P08590 195 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 ZNF131P52739 623 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 PLCB2Q00722 1185 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 KCNA1Q09470 495 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 EMC2Q15006 297 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 HSP90AA4PQ58FG1 418 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 BBXQ8WY36 941 aaPredicted RBP16.66■□□□□ 0.26
SREK1-209ENST00000520953 KIFC3Q9BVG8 833 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 AP5M1Q9H0R1 490 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 TUT1Q9H6E5 874 aaKnown RBP16.66■□□□□ 0.26
SREK1-209ENST00000520953 NRBP2Q9NSY0 501 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 NRBP1Q9UHY1 535 aa16.66■□□□□ 0.26
SREK1-209ENST00000520953 INSRRP14616 1297 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 POLGP54098 1239 aaPredicted RBP16.65■□□□□ 0.26
SREK1-209ENST00000520953 ZC2HC1CQ53FD0 456 aaPredicted RBP16.65■□□□□ 0.26
SREK1-209ENST00000520953 PXYLP1Q8TE99 480 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 HSD3B7Q9H2F3 369 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 DHX33Q9H6R0 707 aaKnown RBP16.65■□□□□ 0.26
SREK1-209ENST00000520953 PARVGQ9HBI0 331 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 KCND2Q9NZV8 630 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 GRK4P32298 578 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 HOXD13P35453 343 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
SREK1-209ENST00000520953 HIC1Q14526 733 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 NELFCDQ8IXH7 590 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 LRRC71Q8N4P6 559 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 SCFD1Q8WVM8 642 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 EEF2KMTQ96G04 330 aa16.65■□□□□ 0.26
SREK1-209ENST00000520953 ADAMTS4O75173 837 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 DGAT1O75907 488 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 PRPF6O94906 941 aaKnown RBP16.64■□□□□ 0.25
SREK1-209ENST00000520953 GJB1P08034 283 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 ODR4Q5SWX8 454 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 CCDC47Q96A33 483 aaKnown RBP16.64■□□□□ 0.25
SREK1-209ENST00000520953 SEMA6BQ9H3T3 888 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 MRPL44Q9H9J2 332 aaKnown RBP16.64■□□□□ 0.25
SREK1-209ENST00000520953 ATP6V0A4Q9HBG4 840 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 ODF2LQ9ULJ1 636 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 COL4A3BPQ9Y5P4 624 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 RARBP10826 455 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 PEX3P56589 373 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 GJA9P57773 515 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 GNASQ5JWF2 1037 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 ASAP3Q8TDY4 903 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 FAM167AQ96KS9 214 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 POLR3FQ9H1D9 316 aaPredicted RBP16.64■□□□□ 0.25
SREK1-209ENST00000520953 XPNPEP3Q9NQH7 507 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 Q9Y3F1 56 aa16.64■□□□□ 0.25
SREK1-209ENST00000520953 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.64■□□□□ 0.25
SREK1-209ENST00000520953 ZNF500O60304 480 aaPredicted RBP16.63■□□□□ 0.25
SREK1-209ENST00000520953 F2P00734 622 aa16.63■□□□□ 0.25
SREK1-209ENST00000520953 CPT1AP50416 773 aa16.63■□□□□ 0.25
SREK1-209ENST00000520953 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
SREK1-209ENST00000520953 CXCL17Q6UXB2 119 aa16.63■□□□□ 0.25
SREK1-209ENST00000520953 SLAIN1Q8ND83 568 aa16.63■□□□□ 0.25
SREK1-209ENST00000520953 ZNF668Q96K58 619 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms