RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 PHF20Q9BVI0 1012 aa11.86□□□□□ -0.51
EXTL3-208ENST00000520940 NSUN3Q9H649 340 aaKnown RBP11.86□□□□□ -0.51
EXTL3-208ENST00000520940 LRFN2Q9ULH4 789 aa11.86□□□□□ -0.51
EXTL3-208ENST00000520940 KCNJ14Q9UNX9 436 aa11.86□□□□□ -0.51
EXTL3-208ENST00000520940 AKT3Q9Y243 479 aa11.86□□□□□ -0.51
EXTL3-208ENST00000520940 MRPL42Q9Y6G3 142 aaKnown RBP11.86□□□□□ -0.51
EXTL3-208ENST00000520940 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.85□□□□□ -0.51
EXTL3-208ENST00000520940 DENND3A2RUS2 1198 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 GPR182O15218 404 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 SLC37A4O43826 429 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 PSMD10O75832 226 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 IBSPP21815 317 aaPredicted RBP11.85□□□□□ -0.51
EXTL3-208ENST00000520940 KCNA5P22460 613 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 SARSP49591 514 aaKnown RBP11.85□□□□□ -0.51
EXTL3-208ENST00000520940 INF2Q27J81 1249 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 PAN2Q504Q3 1202 aaKnown RBP11.85□□□□□ -0.51
EXTL3-208ENST00000520940 EFCAB12Q6NXP0 572 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 FAM43BQ6ZT52 329 aaPredicted RBP11.85□□□□□ -0.51
EXTL3-208ENST00000520940 MIER3Q7Z3K6 550 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 FAM228AQ86W67 206 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 LRRC71Q8N4P6 559 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 ADAM2Q99965 735 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 PLVAPQ9BX97 442 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 LMAN2LQ9H0V9 348 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 DDX25Q9UHL0 483 aaKnown RBP11.85□□□□□ -0.51
EXTL3-208ENST00000520940 ST3GAL5Q9UNP4 418 aa11.85□□□□□ -0.51
EXTL3-208ENST00000520940 CCDC194A0A1B0GVG4 234 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 GRM6O15303 877 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 MMP1P03956 469 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 XBP1P17861 261 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 TMOD1P28289 359 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 GATMP50440 423 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 AK2P54819 239 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 LEXMQ3ZCV2 418 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 B3GNT9Q6UX72 402 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 RGS18Q9NS28 235 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 C1orf112Q9NSG2 853 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
EXTL3-208ENST00000520940 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
EXTL3-208ENST00000520940 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
EXTL3-208ENST00000520940 C9IYK1 514 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 DTNBO60941 627 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 CSPG5O95196 566 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 CTDNEP1O95476 244 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 NLRP11P59045 1033 aaKnown RBP11.83□□□□□ -0.52
EXTL3-208ENST00000520940 TBC1D8BQ0IIM8 1120 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 COL19A1Q14993 1142 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 TARBP2Q15633 366 aaKnown RBP11.83□□□□□ -0.52
EXTL3-208ENST00000520940 LETM2Q2VYF4 491 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 SLC24A5Q71RS6 500 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 NEK8Q86SG6 692 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 P2RX5Q93086 422 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 PABPC5Q96DU9 382 aaKnown RBP11.83□□□□□ -0.52
EXTL3-208ENST00000520940 ADAMTS10Q9H324 1103 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 GJB4Q9NTQ9 266 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 ORC3Q9UBD5 711 aaPredicted RBP11.83□□□□□ -0.52
EXTL3-208ENST00000520940 PCDHB7Q9Y5E2 793 aa11.83□□□□□ -0.52
EXTL3-208ENST00000520940 TMEM150BA6NC51 233 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 TBKBP1A7MCY6 615 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 H3BQ06 376 aaPredicted RBP11.82□□□□□ -0.52
EXTL3-208ENST00000520940 LARGE1O95461 756 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 ITGB1P05556 798 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 GCFC2P16383 781 aaKnown RBP11.82□□□□□ -0.52
EXTL3-208ENST00000520940 EIF4BP23588 611 aaKnown RBP11.82□□□□□ -0.52
EXTL3-208ENST00000520940 GPC3P51654 580 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 DSC3Q14574 896 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 MTERF2Q49AM1 385 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 NAALADL2Q58DX5 795 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 XKR3Q5GH77 459 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 PPP4R3AQ6IN85 833 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 PTCRAQ6ISU1 281 aaPredicted RBP11.82□□□□□ -0.52
EXTL3-208ENST00000520940 EP400NLQ6ZTU2 488 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 PIK3AP1Q6ZUJ8 805 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 KLHL23Q8NBE8 558 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.82□□□□□ -0.52
EXTL3-208ENST00000520940 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 OXER1Q8TDS5 423 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 WASF1Q92558 559 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 GTF3C6Q969F1 213 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 SCLT1Q96NL6 688 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 NIFKQ9BYG3 293 aaKnown RBP11.82□□□□□ -0.52
EXTL3-208ENST00000520940 ALG13Q9NP73 1137 aaKnown RBP11.82□□□□□ -0.52
EXTL3-208ENST00000520940 KCNMB3Q9NPA1 279 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 TMEM161AQ9NX61 479 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 VAV3Q9UKW4 847 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 PLAGL2Q9UPG8 496 aa11.82□□□□□ -0.52
EXTL3-208ENST00000520940 NCK2O43639 380 aa11.81□□□□□ -0.52
EXTL3-208ENST00000520940 CCNT1O60563 726 aaKnown RBP11.81□□□□□ -0.52
EXTL3-208ENST00000520940 STBD1O95210 358 aa11.81□□□□□ -0.52
EXTL3-208ENST00000520940 DARSP14868 501 aaKnown RBP11.81□□□□□ -0.52
EXTL3-208ENST00000520940 IL9P15248 144 aa11.81□□□□□ -0.52
EXTL3-208ENST00000520940 DNAJB1P25685 340 aa11.81□□□□□ -0.52
EXTL3-208ENST00000520940 PSMC5P62195 406 aa11.81□□□□□ -0.52
EXTL3-208ENST00000520940 HYAL1Q12794 435 aa11.81□□□□□ -0.52
EXTL3-208ENST00000520940 PPP2R5CQ13362 524 aa11.81□□□□□ -0.52
EXTL3-208ENST00000520940 DRP2Q13474 957 aa11.81□□□□□ -0.52
EXTL3-208ENST00000520940 ME3Q16798 604 aa11.81□□□□□ -0.52
EXTL3-208ENST00000520940 FAM102BQ5T8I3 360 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms