RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 HAUS3Q68CZ6 603 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 DTHD1Q6ZMT9 781 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 TRMT1LQ7Z2T5 733 aaKnown RBP18.21■□□□□ 0.51
TNPO1-212ENST00000520850 CATSPER3Q86XQ3 398 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 ZBTB10Q96DT7 871 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 LRCH3Q96II8 777 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 CEP170P1Q96L14 293 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 NACC1Q96RE7 527 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 MORC2Q9Y6X9 1032 aaPredicted RBP18.21■□□□□ 0.51
TNPO1-212ENST00000520850 SLC26A4O43511 780 aa18.2■□□□□ 0.5
TNPO1-212ENST00000520850 KCNJ6P48051 423 aa18.2■□□□□ 0.5
TNPO1-212ENST00000520850 SLC7A3Q8WY07 619 aa18.2■□□□□ 0.5
TNPO1-212ENST00000520850 ADAMTS10Q9H324 1103 aa18.2■□□□□ 0.5
TNPO1-212ENST00000520850 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
TNPO1-212ENST00000520850 DBR1Q9UK59 544 aaKnown RBP18.2■□□□□ 0.5
TNPO1-212ENST00000520850 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
TNPO1-212ENST00000520850 PCDHA11Q9Y5I1 949 aa18.2■□□□□ 0.5
TNPO1-212ENST00000520850 SZT2Q5T011 3432 aa18.2■□□□□ 0.5
TNPO1-212ENST00000520850 VPS37CA5D8V6 355 aaPredicted RBP18.19■□□□□ 0.5
TNPO1-212ENST00000520850 ZBBXA8MT70 800 aa18.19■□□□□ 0.5
TNPO1-212ENST00000520850 ASAP2O43150 1006 aa18.19■□□□□ 0.5
TNPO1-212ENST00000520850 GHRP10912 638 aa18.19■□□□□ 0.5
TNPO1-212ENST00000520850 CYP4A11Q02928 519 aa18.19■□□□□ 0.5
TNPO1-212ENST00000520850 TCTN1Q2MV58 587 aa18.19■□□□□ 0.5
TNPO1-212ENST00000520850 TCP11Q8WWU5 503 aa18.19■□□□□ 0.5
TNPO1-212ENST00000520850 PBX4Q9BYU1 374 aa18.19■□□□□ 0.5
TNPO1-212ENST00000520850 OSBPL7Q9BZF2 842 aa18.19■□□□□ 0.5
TNPO1-212ENST00000520850 SUGCTQ9HAC7 445 aa18.19■□□□□ 0.5
TNPO1-212ENST00000520850 GPR182O15218 404 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 MED24O75448 989 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 DGAT1O75907 488 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 EIF4BP23588 611 aaKnown RBP18.18■□□□□ 0.5
TNPO1-212ENST00000520850 GPC3P51654 580 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 CLCN3P51790 818 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 NPEPPSP55786 919 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 NLRP11P59045 1033 aaKnown RBP18.18■□□□□ 0.5
TNPO1-212ENST00000520850 POU5F1BQ06416 359 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 RESTQ13127 1097 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 IL17AQ16552 155 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 XKR9Q5GH70 373 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 ZNF410Q86VK4 478 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 HERC6Q8IVU3 1022 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 TOP1MTQ969P6 601 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 AK8Q96MA6 479 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 AGO3Q9H9G7 860 aaKnown RBP18.18■□□□□ 0.5
TNPO1-212ENST00000520850 MSRAQ9UJ68 235 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 PADI3Q9ULW8 664 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 AKT3Q9Y243 479 aa18.18■□□□□ 0.5
TNPO1-212ENST00000520850 SIP14410 1827 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 TMEM150BA6NC51 233 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 ENPP3O14638 875 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 ZBTB39O15060 712 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 RPS6KA5O75582 802 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 GJB5O95377 273 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 AMHP03971 560 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 VTNP04004 478 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 HSP90AA1P07900 732 aaKnown RBP18.17■□□□□ 0.5
TNPO1-212ENST00000520850 DNAJB2P25686 324 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 RARRES1P49788 294 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 POLGP54098 1239 aaPredicted RBP18.17■□□□□ 0.5
TNPO1-212ENST00000520850 TMEM62Q0P6H9 643 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 PLA2G4FQ68DD2 849 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 LRRC71Q8N4P6 559 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 INO80BQ9C086 356 aaPredicted RBP18.17■□□□□ 0.5
TNPO1-212ENST00000520850 CDHR5Q9HBB8 845 aa18.17■□□□□ 0.5
TNPO1-212ENST00000520850 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
TNPO1-212ENST00000520850 SUCLA2Q9P2R7 463 aaPredicted RBP18.17■□□□□ 0.5
TNPO1-212ENST00000520850 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.16■□□□□ 0.5
TNPO1-212ENST00000520850 PAK2Q13177 524 aa18.16■□□□□ 0.5
TNPO1-212ENST00000520850 MXD4Q14582 209 aaPredicted RBP18.16■□□□□ 0.5
TNPO1-212ENST00000520850 KIZQ2M2Z5 673 aa18.16■□□□□ 0.5
TNPO1-212ENST00000520850 HYIQ5T013 277 aa18.16■□□□□ 0.5
TNPO1-212ENST00000520850 KRT79Q5XKE5 535 aa18.16■□□□□ 0.5
TNPO1-212ENST00000520850 ZNF579Q8NAF0 562 aaKnown RBP18.16■□□□□ 0.5
TNPO1-212ENST00000520850 RAD9AQ99638 391 aa18.16■□□□□ 0.5
TNPO1-212ENST00000520850 TSPYL2Q9H2G4 693 aaPredicted RBP18.16■□□□□ 0.5
TNPO1-212ENST00000520850 ERVK-5Q9HDB9 667 aa18.16■□□□□ 0.5
TNPO1-212ENST00000520850 NOC2LQ9Y3T9 749 aaKnown RBP18.16■□□□□ 0.5
TNPO1-212ENST00000520850 MICAL3Q7RTP6 2002 aa18.16■□□□□ 0.5
TNPO1-212ENST00000520850 GRXCR1A8MXD5 290 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 DARSP14868 501 aaKnown RBP18.15■□□□□ 0.5
TNPO1-212ENST00000520850 CD52P31358 61 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 HTRA4P83105 476 aaPredicted RBP18.15■□□□□ 0.5
TNPO1-212ENST00000520850 DRP2Q13474 957 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 PCBP1Q15365 356 aaKnown RBP eCLIP18.15■□□□□ 0.5
TNPO1-212ENST00000520850 SF3A1Q15459 793 aaKnown RBP18.15■□□□□ 0.5
TNPO1-212ENST00000520850 ZNF697Q5TEC3 545 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.15■□□□□ 0.54e-7■■■■■ 34
TNPO1-212ENST00000520850 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 CRIPAKQ8N1N5 446 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 TMEM40Q8WWA1 233 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 PSPC1Q8WXF1 523 aaKnown RBP18.15■□□□□ 0.5
TNPO1-212ENST00000520850 TIFAQ96CG3 184 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 MTRQ99707 1265 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 SH2D3AQ9BRG2 576 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 GCOM2Q9BZD3 368 aaPredicted RBP18.15■□□□□ 0.5
TNPO1-212ENST00000520850 SEMA6BQ9H3T3 888 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 DAXXQ9UER7 740 aaPredicted RBP18.15■□□□□ 0.5
TNPO1-212ENST00000520850 ST3GAL5Q9UNP4 418 aa18.15■□□□□ 0.5
TNPO1-212ENST00000520850 LONP1P36776 959 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms