RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	EPB41L2	O43491	1005 aa	Known RBP	4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	NPHS1	O60500	1241 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	HSP90AA1	P07900	732 aa	Known RBP	4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	SRF	P11831	508 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	MAP4	P27816	1152 aa	Known RBP	4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	LTK	P29376	864 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	SLC5A3	P53794	718 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	SLC16A1	P53985	500 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	BCAR1	P56945	870 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	GPSM2	P81274	684 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	BTK	Q06187	659 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	TRIM28	Q13263	835 aa	Known RBP	4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	IL10RA	Q13651	578 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	MOGS	Q13724	837 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	ZNF280D	Q6N043	979 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	MAEA	Q7L5Y9	396 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	CCDC33	Q8N5R6	958 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	MARCH10	Q8NA82	808 aa	Predicted RBP	4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	TSPEAR	Q8WU66	669 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	KAT5	Q92993	513 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	UTP4	Q969X6	686 aa	Known RBP	4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	MYL10	Q9BUA6	226 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	VPS45	Q9NRW7	570 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	ERVK13-1	Q9NX77	482 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	FBLN5	Q9UBX5	448 aa		4.38	□□□□□ -1.71
SREK1-208	ENST00000520580	POM121B	A6NF01	834 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	FAM90A27P	A6NNH2	459 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	GNAT3	A8MTJ3	354 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580		H3BS24	57 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	TERT	O14746	1132 aa	Known RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	SLC27A2	O14975	620 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	ZNF865	P0CJ78	1059 aa	Predicted RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	BCR	P11274	1271 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	ELN	P15502	786 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	PTPN1	P18031	435 aa	Known RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	STT3A	P46977	705 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	CASP5	P51878	434 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	AGFG1	P52594	562 aa	Known RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	DDX10	Q13206	875 aa	Known RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	MUM1	Q2TAK8	710 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	APOA5	Q6Q788	366 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	ESPNL	Q6ZVH7	1005 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	RSRC2	Q7L4I2	434 aa	Known RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	FAM214B	Q7L5A3	538 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	WAPL	Q7Z5K2	1190 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	C1orf131	Q8NDD1	294 aa	Known RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	TMEM52	Q8NDY8	209 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	PLBD2	Q8NHP8	589 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	DLG3	Q92796	817 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	FERMT2	Q96AC1	680 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	TUBGCP5	Q96RT8	1024 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	EPB41L1	Q9H4G0	881 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	ZMAT3	Q9HA38	289 aa	Known RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	IFT122	Q9HBG6	1241 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	HDAC9	Q9UKV0	1011 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	COA3	Q9Y2R0	106 aa	Predicted RBP	4.37	□□□□□ -1.71
SREK1-208	ENST00000520580	TELO2	Q9Y4R8	837 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580		U3KQE9	123 aa		4.37	□□□□□ -1.71
SREK1-208	ENST00000520580		H7BY64	318 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	TCERG1	O14776	1098 aa	Known RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	SNX2	O60749	519 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	FTL	P02792	175 aa	Predicted RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	MTHFD2	P13995	350 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	SNRPN	P63162	240 aa	Known RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	SET	Q01105	290 aa	Predicted RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	PAN2	Q504Q3	1202 aa	Known RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	KLHDC7A	Q5VTJ3	777 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	PRAMEF9	Q5VWM5	478 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	TLDC1	Q6P9B6	456 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	KCTD1	Q719H9	257 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	DZIP1L	Q8IYY4	767 aa	Known RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	KRT78	Q8N1N4	520 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	TMEM130	Q8N3G9	435 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	KLHDC4	Q8TBB5	520 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	PIWIL2	Q8TC59	973 aa	Known RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	NRG4	Q8WWG1	115 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	SSH1	Q8WYL5	1049 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	UBE2F	Q969M7	185 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	RAB24	Q969Q5	203 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	TBC1D20	Q96BZ9	403 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	ACE2	Q9BYF1	805 aa	Predicted RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	CEP41	Q9BYV8	373 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	C22orf23	Q9BZE7	217 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	USP36	Q9P275	1121 aa	Known RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	EVL	Q9UI08	416 aa	Predicted RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	DUSP13	Q9UII6	198 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	TPCN1	Q9ULQ1	816 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	LRRC14B	A6NHZ5	514 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	BUB1B	O60566	1050 aa	Predicted RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	CLASP2	O75122	1294 aa	Known RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	MME	P08473	750 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	MYF5	P13349	255 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	TACR1	P25103	407 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	RAB1A	P62820	205 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	MRPS9	P82933	396 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms