RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 UBE2OQ9C0C9 1292 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-220ENST00000520260 GABBR1Q9UBS5 961 aa6.28□□□□□ -1.4
CTNNA1-220ENST00000520260 SEPT9Q9UHD8 586 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-220ENST00000520260 DNM3Q9UQ16 869 aa6.28□□□□□ -1.4
CTNNA1-220ENST00000520260 MAFBQ9Y5Q3 323 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-220ENST00000520260 SQORQ9Y6N5 450 aa6.28□□□□□ -1.4
CTNNA1-220ENST00000520260 IGSF9BQ9UPX0 1349 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 FRMPD3Q5JV73 1810 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 SMIM35A0A1B0GVV1 85 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 ARHGEF35A5YM69 484 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 HAS3O00219 553 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 RIOK3O14730 519 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 DGAT1O75907 488 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 YEATS4O95619 227 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 ZSCAN22P10073 491 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 CYP2C9P11712 490 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 SKIP12755 728 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 SFPQP23246 707 aaKnown RBP eCLIP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 MARK3P27448 753 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 THPOP40225 353 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 CCT6AP40227 531 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 CDK7P50613 346 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 AMPD3Q01432 767 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 PRKCEQ02156 737 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 GABPB1Q06547 395 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 RBL2Q08999 1139 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 PTGDRQ13258 359 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 ITGB3BPQ13352 177 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 COL9A3Q14050 684 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 LRRC26Q2I0M4 334 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 MFSD5Q6N075 450 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 ABHD15Q6UXT9 468 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 CCDC73Q6ZRK6 1079 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 STXBP4Q6ZWJ1 553 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 LRRC8DQ7L1W4 858 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 RPAINQ86UA6 219 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 TPH2Q8IWU9 490 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 PDCL2Q8N4E4 241 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 METTL13Q8N6R0 699 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 KRI1Q8N9T8 703 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 SNX29Q8TEQ0 813 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 DIS3LQ8TF46 1054 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 PSPC1Q8WXF1 523 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 COPS5Q92905 334 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 TNFRSF25Q93038 417 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 CEP170P1Q96L14 293 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 IFT74Q96LB3 600 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 DRC1Q96MC2 740 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 LXNQ9BS40 222 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 C16orf70Q9BSU1 422 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 POLR3CQ9BUI4 534 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 CUEDC2Q9H467 287 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 MAGEF1Q9HAY2 307 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 ATP6V0A4Q9HBG4 840 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 PDLIM7Q9NR12 457 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 ANKEF1Q9NU02 776 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 USP25Q9UHP3 1055 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 AKT3Q9Y243 479 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 PCDHA2Q9Y5H9 948 aa6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 MORC2Q9Y6X9 1032 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-220ENST00000520260 MCM3APO60318 1980 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 IGKV6D-21A0A0A0MT36 114 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 MYADML2A6NDP7 307 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 RSPH10B2B2RC85 870 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 GPR182O15218 404 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 HOXA2O43364 376 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 SORBS3O60504 671 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 B4GALT4O60513 344 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 ATP9AO75110 1047 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 PPP6R2O75170 966 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 LYPLA2O95372 231 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 AMHP03971 560 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 KRT18P05783 430 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 RSPH10BP0C881 870 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 STAG3L1P0CL83 205 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 RPA1P27694 616 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 YWHABP31946 246 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 BMP8BP34820 402 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 TECP42680 631 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 PHKA2P46019 1235 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 SMTNP53814 917 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 PSMC6P62333 389 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 FAM193AP78312 1265 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 IGBP1P78318 339 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 ATP2C1P98194 919 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 SP2Q02086 613 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 SEMA3FQ13275 785 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 IKBKEQ14164 716 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 ZNF174Q15697 407 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 TMEM132AQ24JP5 1023 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 DNTTIP2Q5QJE6 756 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 SERINC5Q86VE9 423 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 ZNF410Q86VK4 478 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 ZBTB8OSQ8IWT0 167 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 RNF214Q8ND24 703 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 KIAA1524Q8TCG1 905 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 OXER1Q8TDS5 423 aa6.26□□□□□ -1.41
CTNNA1-220ENST00000520260 LMBR1Q8WVP7 490 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms