RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 TET1Q8NFU7 2136 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 LOXHD1Q8IVV2 1947 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 NBNO60934 754 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 PARNO95453 639 aaKnown RBP13.22□□□□□ -0.29
HPS4-218ENST00000519774 CHRNA1P02708 482 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 RPLP2P05387 115 aaKnown RBP13.22□□□□□ -0.29
HPS4-218ENST00000519774 GHRP10912 638 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 TMOD1P28289 359 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 NASPP49321 788 aaPredicted RBP13.22□□□□□ -0.29
HPS4-218ENST00000519774 SHHQ15465 462 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 ECM1Q16610 540 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 TMEM240Q5SV17 173 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 IER5Q5VY09 327 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 C16orf59Q7L2K0 433 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 RPAINQ86UA6 219 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 KIAA0319LQ8IZA0 1049 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 TDHQ8IZJ6 230 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 ZNF668Q96K58 619 aaPredicted RBP13.22□□□□□ -0.29
HPS4-218ENST00000519774 RNPC3Q96LT9 517 aaKnown RBP13.22□□□□□ -0.29
HPS4-218ENST00000519774 NACC1Q96RE7 527 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 CEP89Q96ST8 783 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 MMTAG2Q9BU76 263 aaKnown RBP13.22□□□□□ -0.29
HPS4-218ENST00000519774 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 DDX19AQ9NUU7 478 aaKnown RBP13.22□□□□□ -0.29
HPS4-218ENST00000519774 KIAA1024Q9UPX6 916 aa13.22□□□□□ -0.29
HPS4-218ENST00000519774 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
HPS4-218ENST00000519774 KDM3AQ9Y4C1 1321 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 ZBBXA8MT70 800 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 USO1O60763 962 aaKnown RBP13.21□□□□□ -0.29
HPS4-218ENST00000519774 MAFO75444 373 aaPredicted RBP13.21□□□□□ -0.29
HPS4-218ENST00000519774 FGBP02675 491 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 PFKMP08237 780 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 NCLP19338 710 aaKnown RBP13.21□□□□□ -0.29
HPS4-218ENST00000519774 LONP1P36776 959 aaKnown RBP13.21□□□□□ -0.29
HPS4-218ENST00000519774 RFC5P40937 340 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 RARRES1P49788 294 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 DNM1Q05193 864 aaKnown RBP13.21□□□□□ -0.29
HPS4-218ENST00000519774 MGAT3Q09327 533 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 DRP2Q13474 957 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 GPNMBQ14956 572 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 EMC2Q15006 297 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 SLC39A14Q15043 492 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 KIZQ2M2Z5 673 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 FAM26DQ5JW98 314 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 OTOP2Q7RTS6 562 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 NME8Q8N427 588 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 LINC01465Q8N7H1 131 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 VWCEQ96DN2 955 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 SCLT1Q96NL6 688 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 PLIN2Q99541 437 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 JPH2Q9BR39 696 aaPredicted RBP13.21□□□□□ -0.29
HPS4-218ENST00000519774 OSBPL7Q9BZF2 842 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 FBXO2Q9UK22 296 aaPredicted RBP13.21□□□□□ -0.29
HPS4-218ENST00000519774 PPME1Q9Y570 386 aa13.21□□□□□ -0.29
HPS4-218ENST00000519774 ARHGEF35A5YM69 484 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 SPTLC2O15270 562 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 CXCL10P02778 98 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 ACTN1P12814 892 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 MUTP22033 750 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 UBA7P41226 1012 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 DNM2P50570 870 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 FBXO47Q5MNV8 452 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 CABP7Q86V35 215 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 LINC00301Q8NCQ3 95 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 RASSF8Q8NHQ8 419 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 CHAMP1Q96JM3 812 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 AK8Q96MA6 479 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 CLIC6Q96NY7 704 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 OSMRQ99650 979 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 MTRQ99707 1265 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 CELF4Q9BZC1 486 aaKnown RBP13.2□□□□□ -0.3
HPS4-218ENST00000519774 CSRNP2Q9H175 543 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 DHX33Q9H6R0 707 aaKnown RBP13.2□□□□□ -0.3
HPS4-218ENST00000519774 CDHR5Q9HBB8 845 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 ATP6V0A4Q9HBG4 840 aa13.2□□□□□ -0.3
HPS4-218ENST00000519774 SUCLA2Q9P2R7 463 aaPredicted RBP13.2□□□□□ -0.3
HPS4-218ENST00000519774 DBR1Q9UK59 544 aaKnown RBP13.2□□□□□ -0.3
HPS4-218ENST00000519774 SRPRBQ9Y5M8 271 aaKnown RBP13.2□□□□□ -0.3
HPS4-218ENST00000519774 TRIOBPQ9H2D6 2365 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 IGKV6-21A0A0C4DH24 114 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 A0A1W2PPC1 479 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 E9PMD0 336 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 DGAT1O75907 488 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 YEATS4O95619 227 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 XRCC6P12956 609 aaKnown RBP eCLIP13.19□□□□□ -0.3
HPS4-218ENST00000519774 NLRP11P59045 1033 aaKnown RBP13.19□□□□□ -0.3
HPS4-218ENST00000519774 GRB10Q13322 594 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 LPIN1Q14693 890 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 TCTN1Q2MV58 587 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 CNKSR3Q6P9H4 555 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 MAEAQ7L5Y9 396 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 KCNK18Q7Z418 384 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 RHPN2Q8IUC4 686 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 EXOC8Q8IYI6 725 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 KRI1Q8N9T8 703 aaKnown RBP13.19□□□□□ -0.3
HPS4-218ENST00000519774 DBF4BQ8NFT6 615 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms