RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 THNSL1Q8IYQ7 743 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 AUTS2Q8WXX7 1259 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 BCAS3Q9H6U6 928 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 TYW1Q9NV66 732 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 TLR7Q9NYK1 1049 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 CLIP2Q9UDT6 1046 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 LZTS1Q9Y250 596 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 MSRB2Q9Y3D2 182 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 NEUROG3Q9Y4Z2 214 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 J3QKU1 62 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 RASA1P20936 1047 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 CALML3P27482 149 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 CD52P31358 61 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 SIM2Q14190 667 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 UBXN2BQ14CS0 331 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 FBXO47Q5MNV8 452 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 TTC39AQ5SRH9 613 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 SH3PXD2AQ5TCZ1 1133 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 TCEAL6Q6IPX3 200 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 RNF19BQ6ZMZ0 732 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 LRRC55Q6ZSA7 311 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 SEPT14Q6ZU15 432 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 ZNF605Q86T29 641 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 TMEFF1Q8IYR6 380 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 TCEAL3Q969E4 200 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 LTB4R2Q9NPC1 389 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 NGRNQ9NPE2 291 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 SETD4Q9NVD3 440 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 EPS15L1Q9UBC2 864 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 ADD3Q9UEY8 706 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 DDX41Q9UJV9 622 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 RAB23Q9ULC3 237 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 TELO2Q9Y4R8 837 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 PCDHB12Q9Y5F1 795 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 SDK1Q7Z5N4 2213 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 ITPR3Q14573 2671 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 DNHD1Q96M86 4753 aa8.08□□□□□ -1.12
CTNNA1-216ENST00000519489 LOC102724159A0A0B4J2E5 919 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 ANHXE9PGG2 379 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 CAND2O75155 1236 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 ZNF806P0C7X5 589 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 BMP3P12645 472 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 USP46P62068 366 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 HTR4Q13639 388 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 PWP2Q15269 919 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 LETM2Q2VYF4 491 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 HSDL1Q3SXM5 330 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 CERS3Q8IU89 383 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 PPTC7Q8NI37 304 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 MKL1Q969V6 931 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 GPR20Q99678 358 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 KATNAL1Q9BW62 490 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 ARRDC1-AS1Q9H2J1 176 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 TMX1Q9H3N1 280 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 PRDM9Q9NQV7 894 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 PKD2L1Q9P0L9 805 aa8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 GREB1LQ9C091 1923 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-216ENST00000519489 CACNA1FO60840 1977 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 TCRBV5S4A2TA0A5A2 114 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 PTPDC1A2A3K4 754 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 FAM187AA6NFU0 413 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 TBKBP1A7MCY6 615 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 CHURC1-FNTBB4DL54 471 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 AXIN1O15169 862 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 MGEA5O60502 916 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 CHGBP05060 677 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 IBSPP21815 317 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 FNTBP49356 437 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 RPS6P62753 249 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 RALBP1Q15311 655 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 SLFN13Q68D06 897 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 ZNF787Q6DD87 383 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 TMC7Q7Z402 723 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 RPAP2Q8IXW5 612 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 STAG1Q8WVM7 1258 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 ZNF512BQ96KM6 892 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 FAM126AQ9BYI3 521 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 OSBPL6Q9BZF3 934 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 CRNKL1Q9BZJ0 848 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 ARMT1Q9H993 441 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 KCNK4Q9NYG8 393 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 CCPG1Q9ULG6 757 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 PRR12Q9ULL5 1215 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 SRPK3Q9UPE1 567 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 RAXQ9Y2V3 346 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 NUMBLQ9Y6R0 609 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 FBN2P35556 2912 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 CACNA1EQ15878 2313 aa8.06□□□□□ -1.12
CTNNA1-216ENST00000519489 CD2BP2O95400 341 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 ICAM1P05362 532 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 UBTFL1P0CB47 393 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 SCG2P13521 617 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 GBP2P32456 591 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 MMP16P51512 607 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 SCAPQ12770 1279 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 MLF2Q15773 248 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 SLC44A4Q53GD3 710 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 SPOUT1Q5T280 376 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 KCTD1Q719H9 257 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms