RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	LMCD1	Q9NZU5	365 aa		27.12	■■□□□ 1.93
CNOT7-204	ENST00000518885	DENND3	A2RUS2	1198 aa		27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	FAM205C	A6NFA0	338 aa		27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	VTN	P04004	478 aa		27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	TARBP2	Q15633	366 aa	Known RBP	27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	NPAS4	Q8IUM7	802 aa		27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	FIBCD1	Q8N539	461 aa		27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	FBXO18	Q8NFZ0	1043 aa		27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	PPM1E	Q8WY54	764 aa		27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	C1orf112	Q9NSG2	853 aa		27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	LRFN2	Q9ULH4	789 aa		27.11	■■□□□ 1.93
CNOT7-204	ENST00000518885	ARHGEF15	O94989	841 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	GUCY1B3	Q02153	619 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	LRRC71	Q8N4P6	559 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	LINC01465	Q8N7H1	131 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	FBXO22	Q8NEZ5	403 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	NEK9	Q8TD19	979 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	SLC7A3	Q8WY07	619 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	OSMR	Q99650	979 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	ZSWIM4	Q9H7M6	989 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	ERVK-5	Q9HDB9	667 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	MTUS1	Q9ULD2	1270 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	NOC2L	Q9Y3T9	749 aa	Known RBP	27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	TRANK1	O15050	2925 aa		27.1	■■□□□ 1.93
CNOT7-204	ENST00000518885	EML1	O00423	815 aa		27.09	■■□□□ 1.93
CNOT7-204	ENST00000518885	GPR32	O75388	356 aa		27.09	■■□□□ 1.93
CNOT7-204	ENST00000518885	NLRP11	P59045	1033 aa	Known RBP	27.09	■■□□□ 1.93
CNOT7-204	ENST00000518885	TMEM266	Q2M3C6	531 aa		27.09	■■□□□ 1.93
CNOT7-204	ENST00000518885	C4orf19	Q8IY42	314 aa		27.09	■■□□□ 1.93
CNOT7-204	ENST00000518885	MICALL1	Q8N3F8	863 aa		27.09	■■□□□ 1.93
CNOT7-204	ENST00000518885	NOL7	Q9UMY1	257 aa	Known RBP	27.09	■■□□□ 1.93
CNOT7-204	ENST00000518885	ST3GAL5	Q9UNP4	418 aa		27.09	■■□□□ 1.93
CNOT7-204	ENST00000518885	GRB10	Q13322	594 aa		27.08	■■□□□ 1.93
CNOT7-204	ENST00000518885	NLRP7	Q8WX94	980 aa		27.08	■■□□□ 1.93
CNOT7-204	ENST00000518885	LXN	Q9BS40	222 aa		27.08	■■□□□ 1.93
CNOT7-204	ENST00000518885	TTC12	Q9H892	705 aa	Predicted RBP	27.08	■■□□□ 1.93
CNOT7-204	ENST00000518885	CYP26B1	Q9NR63	512 aa		27.08	■■□□□ 1.93
CNOT7-204	ENST00000518885	MTCH2	Q9Y6C9	303 aa		27.08	■■□□□ 1.93
CNOT7-204	ENST00000518885	EYS	Q5T1H1	3165 aa		27.08	■■□□□ 1.93
CNOT7-204	ENST00000518885	ADGRA3	Q8IWK6	1321 aa		27.08	■■□□□ 1.93
CNOT7-204	ENST00000518885	RFXAP	O00287	272 aa		27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	MAF	O75444	373 aa	Predicted RBP	27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	EIF4B	P23588	611 aa	Known RBP	27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	RFC5	P40937	340 aa		27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	TRAPPC10	P48553	1259 aa		27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	SARS	P49591	514 aa	Known RBP	27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	CCDC85B	Q15834	202 aa	Predicted RBP	27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	PTPRO	Q16827	1216 aa		27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	ANO5	Q75V66	913 aa		27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	TBC1D32	Q96NH3	1257 aa		27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	PPP1R16B	Q96T49	567 aa		27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	INO80B	Q9C086	356 aa	Predicted RBP	27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	CDHR5	Q9HBB8	845 aa		27.07	■■□□□ 1.92
CNOT7-204	ENST00000518885	WDR81	Q562E7	1941 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	EPOP	A6NHQ4	379 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	GAS2	O43903	313 aa	Known RBP	27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	STBD1	O95210	358 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	ZSCAN20	P17040	1043 aa	Predicted RBP	27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	TXK	P42681	527 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	GPC3	P51654	580 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	POLG	P54098	1239 aa	Predicted RBP	27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	BTG3	Q14201	252 aa	Predicted RBP	27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	SLC24A5	Q71RS6	500 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	NOSTRIN	Q8IVI9	506 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	TMEM40	Q8WWA1	233 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	CEP170P1	Q96L14	293 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	CCDC43	Q96MW1	224 aa	Known RBP	27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	GCOM2	Q9BZD3	368 aa	Predicted RBP	27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	ADAMTS10	Q9H324	1103 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	RGS18	Q9NS28	235 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	PCDHB7	Q9Y5E2	793 aa		27.06	■■□□□ 1.92
CNOT7-204	ENST00000518885	IGKV6-21	A0A0C4DH24	114 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	DGKI	O75912	1065 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	ATP2B1	P20020	1258 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	YWHAB	P31946	246 aa	Known RBP	27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	MCM7	P33993	719 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	SPIRE1	Q08AE8	756 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	EPC2	Q52LR7	807 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	ZNF410	Q86VK4	478 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	FAM228A	Q86W67	206 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	TMEM192	Q8IY95	271 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	CMTR2	Q8IYT2	770 aa	Known RBP	27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	GDPD5	Q8WTR4	605 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	LINC01599	Q8WXQ3	324 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	ADAM2	Q99965	735 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	C17orf80	Q9BSJ5	609 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	TMX1	Q9H3N1	280 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	THEG	Q9P2T0	379 aa		27.05	■■□□□ 1.92
CNOT7-204	ENST00000518885	RB1	P06400	928 aa		27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	SKIV2L	Q15477	1246 aa	Known RBP	27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	RTN4RL1	Q86UN2	441 aa	Predicted RBP	27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	TPH2	Q8IWU9	490 aa		27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	TCP11	Q8WWU5	503 aa		27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	DYDC2	Q96IM9	177 aa		27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	MTMR9	Q96QG7	549 aa		27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	EIF2AK1	Q9BQI3	630 aa	Known RBP	27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	SUCLA2	Q9P2R7	463 aa	Predicted RBP	27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	UNC80	Q8N2C7	3258 aa		27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	EVPL	Q92817	2033 aa		27.04	■■□□□ 1.92
CNOT7-204	ENST00000518885	DARS	P14868	501 aa	Known RBP	27.03	■■□□□ 1.92

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms