RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	C16orf59	Q7L2K0	433 aa		4.41	□□□□□ -1.7
PCM1-208	ENST00000518877	HIPK4	Q8NE63	616 aa		4.41	□□□□□ -1.7
PCM1-208	ENST00000518877	RABGGTA	Q92696	567 aa		4.41	□□□□□ -1.7
PCM1-208	ENST00000518877	HAS1	Q92839	578 aa		4.41	□□□□□ -1.7
PCM1-208	ENST00000518877	CBLC	Q9ULV8	474 aa		4.41	□□□□□ -1.7
PCM1-208	ENST00000518877	PRAMEF22	A3QJZ6	481 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	SCD	O00767	359 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	WNT9A	O14904	365 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	GSTA4	O15217	222 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	FAM20B	O75063	409 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	CLASP2	O75122	1294 aa	Known RBP	4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	RHOBTB3	O94955	611 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	GC	P02774	474 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	ATXN1	P54253	815 aa	Known RBP	4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	ATP2C1	P98194	919 aa	Predicted RBP	4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	MAP3K12	Q12852	859 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	RAB33A	Q14088	237 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	FAM47C	Q5HY64	1035 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	SYNE4	Q8N205	404 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	PCDH19	Q8TAB3	1148 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	ZNF669	Q96BR6	464 aa	Predicted RBP	4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	GPR87	Q9BY21	358 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	PTGFRN	Q9P2B2	879 aa		4.4	□□□□□ -1.71
PCM1-208	ENST00000518877	GOLGA8B	A8MQT2	603 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	ADCY3	O60266	1144 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	ADRA1B	P35368	520 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	DNM2	P50570	870 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	GUCY1A3	Q02108	690 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	ACAP1	Q15027	740 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	ELAVL1	Q15717	326 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	MBNL2	Q5VZF2	373 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	SPATC1	Q76KD6	591 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	GPR150	Q8NGU9	434 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	CALML6	Q8TD86	181 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	PTPRN2	Q92932	1015 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	LPP	Q93052	612 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	GBP4	Q96PP9	640 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	CDC6	Q99741	560 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	SPATA9	Q9BWV2	254 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	ZNHIT2	Q9UHR6	403 aa		4.39	□□□□□ -1.71
PCM1-208	ENST00000518877	CCDC66	A2RUB6	948 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	ZNF561-AS1	K7EIQ3	104 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	TRAF5	O00463	557 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	H2AFY	O75367	372 aa	Known RBP	4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	NAT1	P18440	290 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	FBL	P22087	321 aa	Known RBP	4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	APEX1	P27695	318 aa	Known RBP	4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	TOB2	Q14106	344 aa	Predicted RBP	4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	FOXB2	Q5VYV0	432 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	KLHDC10	Q6PID8	442 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	GAREM2	Q75VX8	874 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	MRGPRE	Q86SM8	312 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	ASB15	Q8WXK1	588 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	RPL10L	Q96L21	214 aa	Known RBP	4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	IPO9	Q96P70	1041 aa	Known RBP	4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	RIOX1	Q9H6W3	641 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	VWA7	Q9Y334	891 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	MSRB2	Q9Y3D2	182 aa		4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.38	□□□□□ -1.71
PCM1-208	ENST00000518877	LMNA	P02545	664 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	C6orf222	P0C671	652 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	PROZ	P22891	400 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	SESN2	P58004	480 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	SMAD3	P84022	425 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	FAM209A	Q5JX71	171 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	FAM111B	Q6SJ93	734 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	VRK3	Q8IV63	474 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	ZNF276	Q8N554	614 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	CISD2	Q8N5K1	135 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	ERCC4	Q92889	916 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	GCDH	Q92947	438 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	ZNF428	Q96B54	188 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	PGBD4	Q96DM1	585 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	SLC6A15	Q9H2J7	730 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	SMURF1	Q9HCE7	757 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	MAGEL2	Q9UJ55	1249 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	ASB1	Q9Y576	335 aa		4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	RBM8A	Q9Y5S9	174 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-208	ENST00000518877	MASP2	O00187	686 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	ARVCF	O00192	962 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	FOXP2	O15409	715 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	APP	P05067	770 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	ADCY7	P51828	1080 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	BPIFB4	P59827	614 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	PTPA	Q15257	358 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	SEC23A	Q15436	765 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	RABL3	Q5HYI8	236 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	MB21D1	Q8N884	522 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	ANKRD53	Q8N9V6	530 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	TCF25	Q9BQ70	676 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	KCNH7	Q9NS40	1196 aa		4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	SAE1	Q9UBE0	346 aa	Predicted RBP	4.36	□□□□□ -1.71
PCM1-208	ENST00000518877	RCAN3	Q9UKA8	241 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms