RNA–Protein interactions for RNA: ENST00000518847.1

TRAPPC2-206, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-206ENST00000518847 SPECC1Q5M775 1068 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 TRIM50Q86XT4 487 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 PDILTQ8N807 584 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 DHX58Q96C10 678 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 PAWRQ96IZ0 340 aaKnown RBP13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 INO80BQ9C086 356 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 DHX33Q9H6R0 707 aaKnown RBP13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 SEL1LQ9UBV2 794 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 PRKAG2Q9UGJ0 569 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 COL4A3BPQ9Y5P4 624 aa13.16□□□□□ -0.3
TRAPPC2-206ENST00000518847 PP2D1A8MPX8 630 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 KIF20AO95235 890 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 GAP43P17677 238 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 ATP4AP20648 1035 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 KLRC1P26715 233 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 CDK7P50613 346 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 NDUFA8P51970 172 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 MLLT1Q03111 559 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 GRIN1Q05586 938 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 POU5F1BQ06416 359 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 NCBP1Q09161 790 aaKnown RBP13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 UGCGQ16739 394 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 MTHFD1LQ6UB35 978 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 CCDC65Q8IXS2 484 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 FMR1NBQ8N0W7 255 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 METTL13Q8N6R0 699 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 PIGOQ8TEQ8 1089 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 LMBR1Q8WVP7 490 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 PNMA5Q96PV4 448 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 KBTBD4Q9NVX7 518 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 HDAC6Q9UBN7 1215 aa13.15□□□□□ -0.3
TRAPPC2-206ENST00000518847 IGKV6-21A0A0C4DH24 114 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 PVALEFA0A1B0GWK0 134 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 LETM1O95202 739 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 CYP2C9P11712 490 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 SLC12A3P55017 1021 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 IGBP1P78318 339 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 DMP1Q13316 513 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 ALCAMQ13740 583 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 HSP90AA2PQ14568 343 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 EMC2Q15006 297 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 E2F4Q16254 413 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 RINT1Q6NUQ1 792 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 EFCAB12Q6NXP0 572 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 KRBA2Q6ZNG9 492 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 SERINC5Q86VE9 423 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 ZNF410Q86VK4 478 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 USP38Q8NB14 1042 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 ANP32EQ9BTT0 268 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 C2orf40Q9H1Z8 148 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 LMBRD1Q9NUN5 540 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 SETD4Q9NVD3 440 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 SQORQ9Y6N5 450 aa13.14□□□□□ -0.31
TRAPPC2-206ENST00000518847 E9PMD0 336 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 STBD1O95210 358 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 C22orf31O95567 290 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 PPP1R2P41236 205 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 EFNA5P52803 228 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 PSMC6P62333 389 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 ADAM17P78536 824 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 PSMD2Q13200 908 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 GPBP1Q86WP2 473 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 C7orf25Q9BPX7 421 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 SUGCTQ9HAC7 445 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 PARVGQ9HBI0 331 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 AKT3Q9Y243 479 aa13.13□□□□□ -0.31
TRAPPC2-206ENST00000518847 PDE4DIPQ5VU43 2346 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 GTPBP6O43824 516 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 USO1O60763 962 aaKnown RBP13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 FAM13AO94988 1023 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 CLTBP09497 229 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 EN2P19622 333 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 RFC2P35250 354 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 RBL2Q08999 1139 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 MCM6Q14566 821 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 ECM1Q16610 540 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 FAM102BQ5T8I3 360 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 PLA2G4FQ68DD2 849 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 TRMT1LQ7Z2T5 733 aaKnown RBP13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 APBB1IPQ7Z5R6 666 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 UBE2Q1Q7Z7E8 422 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 ZBTB8OSQ8IWT0 167 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 FAM126BQ8IXS8 530 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 ENGASEQ8NFI3 743 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 GSDMAQ96QA5 445 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 PLIN2Q99541 437 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 NFKBIZQ9BYH8 718 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 BLOC1S4Q9NUP1 217 aa13.12□□□□□ -0.31
TRAPPC2-206ENST00000518847 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms