RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 IRS2Q9Y4H2 1338 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 DYNC1LI2O43237 492 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZNF205O95201 554 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 SOD2P04179 222 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 SRFP11831 508 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 PLS3P13797 630 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 NOS3P29474 1203 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 ADCYAP1R1P41586 468 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 CTSKP43235 329 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 ITPK1Q13572 414 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 UBE4AQ14139 1066 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 ADGRE1Q14246 886 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 CRY1Q16526 586 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 CPSF6Q16630 551 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 DUSP27Q5VZP5 1158 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 DENND5AQ6IQ26 1287 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 THAP5Q7Z6K1 395 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 TXNRD3Q86VQ6 643 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 EXOC8Q8IYI6 725 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 GPC2Q8N158 579 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 EFHBQ8N7U6 833 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 C2orf69Q8N8R5 385 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 PCDH19Q8TAB3 1148 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 TCTN2Q96GX1 697 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 FAM83CQ9BQN1 747 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 SLC12A9Q9BXP2 914 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZNF700Q9H0M5 742 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 TCF7L1Q9HCS4 588 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 GPRC5CQ9NQ84 441 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 SRP68Q9UHB9 627 aaKnown RBP5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 PNMA8BQ9ULN7 279 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 AFDNP55196 1824 aaKnown RBP5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 PRUNE2Q8WUY3 3088 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 MON2Q7Z3U7 1717 aa5.96□□□□□ -1.46
HMGB1P23-201ENST00000518743 HTTP42858 3142 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 BDP1A6H8Y1 2624 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 POLRMTO00411 1230 aaKnown RBP5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 GABRDO14764 452 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 FKTNO75072 461 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 GRK2P25098 689 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 TPP2P29144 1249 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 GRK3P35626 688 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 EPS15P42566 896 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 TNK2Q07912 1038 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 BRD3Q15059 726 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZNF174Q15697 407 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 LONRF3Q496Y0 759 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 LHFPL2Q6ZUX7 228 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 USP50Q70EL3 339 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 TSPYL5Q86VY4 417 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 SAMD3Q8N6K7 520 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 NAT16Q8N8M0 369 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 AHCYL2Q96HN2 611 aaKnown RBP5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 TBC1D32Q96NH3 1257 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 METTL22Q9BUU2 404 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 EMC7Q9NPA0 242 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZNF277Q9NRM2 450 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 CLEC1BQ9P126 229 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 ADGRE2Q9UHX3 823 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 ANKRD6Q9Y2G4 727 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 NUB1Q9Y5A7 615 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 COMMD10Q9Y6G5 202 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 EYSQ5T1H1 3165 aa5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 MAP2P11137 1827 aaKnown RBP5.95□□□□□ -1.46
HMGB1P23-201ENST00000518743 INSRP06213 1382 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 SMG6Q86US8 1419 aaKnown RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 CCDC66A2RUB6 948 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 H7C1D1 291 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 ABLIM3O94929 683 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 CKMP06732 381 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 GSTM1P09488 218 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 SRGAP2CP0DJJ0 459 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 IFNGR1P15260 489 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZSCAN20P17040 1043 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 RECQLP46063 649 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 MRE11P49959 708 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 CLCN7P51798 805 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 RHBDL3P58872 404 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 RPL11P62913 178 aaKnown RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 CYP4F3Q08477 520 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 KLF1Q13351 362 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 LSAMPQ13449 338 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 MBTPS1Q14703 1052 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 MLC1Q15049 377 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 PTPN21Q16825 1174 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 ABHD17CQ6PCB6 329 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 EP400NLQ6ZTU2 488 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 TMPRSS7Q7RTY8 843 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZAR1Q86SH2 424 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 RAVER1Q8IY67 606 aaKnown RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 MAGEB6Q8N7X4 407 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 MAFAQ8NHW3 353 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 TTC8Q8TAM2 541 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 HTATIP2Q9BUP3 242 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 BOCQ9BWV1 1114 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 PRO3102Q9H379 93 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 CRTAC1Q9NQ79 661 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 THG1LQ9NWX6 298 aaKnown RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 STAP2Q9UGK3 403 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 TCFL5Q9UL49 500 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms