RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 GLRBP48167 497 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 MANFP55145 182 aaKnown RBP6.08□□□□□ -1.44
SQLE-202ENST00000518604 KRT85P78386 507 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 MAP3K12Q12852 859 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 SSPNQ14714 243 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 MYBPC3Q14896 1274 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 PDCD1Q15116 288 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 PKN1Q16512 942 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 KANK2Q63ZY3 851 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 LRSAM1Q6UWE0 723 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 STPG3Q8N7X2 389 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 FERMT2Q96AC1 680 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 TACO1Q9BSH4 297 aaKnown RBP6.08□□□□□ -1.44
SQLE-202ENST00000518604 POFUT1Q9H488 388 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 SPATA6Q9NWH7 488 aaPredicted RBP6.08□□□□□ -1.44
SQLE-202ENST00000518604 KCMF1Q9P0J7 381 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 DENND2AQ9ULE3 1009 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 NUMBLQ9Y6R0 609 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 SHTN1A0MZ66 631 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 SH3D21A4FU49 640 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 TRIM75PA6NK02 468 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 H0Y858 1186 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 ELL2O00472 640 aaPredicted RBP6.07□□□□□ -1.44
SQLE-202ENST00000518604 GABRDO14764 452 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 S100BP04271 92 aaPredicted RBP6.07□□□□□ -1.44
SQLE-202ENST00000518604 ENPP1P22413 925 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 IL13P35225 146 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 RGS3P49796 1198 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 SCAND1P57086 179 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 LINC00310P59036 64 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 IL13RA1P78552 427 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 SMAD4Q13485 552 aaKnown RBP6.07□□□□□ -1.44
SQLE-202ENST00000518604 RTP5Q14D33 572 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 KCNA10Q16322 511 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 ZNF648Q5T619 568 aaPredicted RBP6.07□□□□□ -1.44
SQLE-202ENST00000518604 CBARPQ8N350 705 aaPredicted RBP6.07□□□□□ -1.44
SQLE-202ENST00000518604 DACT3Q96B18 629 aaPredicted RBP6.07□□□□□ -1.44
SQLE-202ENST00000518604 RAX2Q96IS3 184 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 ZSWIM3Q96MP5 696 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 SLC13A1Q9BZW2 595 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 PITHD1Q9GZP4 211 aaPredicted RBP6.07□□□□□ -1.44
SQLE-202ENST00000518604 CCDC8Q9H0W5 538 aaPredicted RBP6.07□□□□□ -1.44
SQLE-202ENST00000518604 SEMA4AQ9H3S1 761 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 MS4A5Q9H3V2 200 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 NTMQ9P121 344 aa6.07□□□□□ -1.44
SQLE-202ENST00000518604 MYPNQ86TC9 1320 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 A0A0A6YYJ9 748 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 PRSS38A1L453 326 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 CUTAO60888 179 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 ALDH1L1O75891 902 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 APOL3O95236 402 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 COL6A1P12109 1028 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 MTHFD2P13995 350 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 ZNF28P17035 718 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 GPR3P46089 330 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 GPR15P49685 360 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 DLX2Q07687 328 aaPredicted RBP6.06□□□□□ -1.44
SQLE-202ENST00000518604 NOLC1Q14978 699 aaKnown RBP eCLIP6.06□□□□□ -1.44
SQLE-202ENST00000518604 UGT8Q16880 541 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 WDR72Q3MJ13 1102 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 VWA3BQ502W6 1294 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 CCDC178Q5BJE1 867 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 BMP8AQ7Z5Y6 402 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 SSH1Q8WYL5 1049 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 ANO3Q9BYT9 981 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 SYNPO2Q9UMS6 1093 aa6.06□□□□□ -1.44
SQLE-202ENST00000518604 LCHNA4D1U4 455 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 PFKMP08237 780 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 RBP3P10745 1247 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 NEK2P51955 445 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 EPHB1P54762 984 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 MLLT6P55198 1093 aaPredicted RBP6.05□□□□□ -1.44
SQLE-202ENST00000518604 MRPS9P82933 396 aaKnown RBP6.05□□□□□ -1.44
SQLE-202ENST00000518604 CD83Q01151 205 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 DGKDQ16760 1214 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 GRAMD4Q6IC98 578 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 TRMT10BQ6PF06 316 aaKnown RBP6.05□□□□□ -1.44
SQLE-202ENST00000518604 AMOTL1Q8IY63 956 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 CHMP4CQ96CF2 233 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 FUBP3Q96I24 572 aaKnown RBP eCLIP6.05□□□□□ -1.44
SQLE-202ENST00000518604 L2HGDHQ9H9P8 463 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 FTSJ1Q9UET6 329 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 PPP2R3BQ9Y5P8 575 aa6.05□□□□□ -1.44
SQLE-202ENST00000518604 A0A0G2JNJ9 132 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 POLD1P28340 1107 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 SARSP49591 514 aaKnown RBP6.04□□□□□ -1.44
SQLE-202ENST00000518604 AFF3P51826 1226 aaKnown RBP6.04□□□□□ -1.44
SQLE-202ENST00000518604 EIF4HQ15056 248 aaKnown RBP6.04□□□□□ -1.44
SQLE-202ENST00000518604 TTF1Q15361 905 aaPredicted RBP6.04□□□□□ -1.44
SQLE-202ENST00000518604 ZBTB41Q5SVQ8 909 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 ODR4Q5SWX8 454 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 PHF19Q5T6S3 580 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 TMEM200BQ69YZ2 307 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 PGM2L1Q6PCE3 622 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 C1orf162Q8NEQ5 155 aaPredicted RBP6.04□□□□□ -1.44
SQLE-202ENST00000518604 FAXDC2Q96IV6 333 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 HAPLN2Q9GZV7 340 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 MTG2Q9H4K7 406 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 Q9UFV3 132 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 TMPRSS11EQ9UL52 423 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms