RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 DDX12PQ92771 950 aa11.68□□□□□ -0.54
BRD9-216ENST00000518251 ATP6V0A1Q93050 837 aa11.68□□□□□ -0.54
BRD9-216ENST00000518251 TOX2Q96NM4 488 aa11.68□□□□□ -0.54
BRD9-216ENST00000518251 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.68□□□□□ -0.547e-11■■□□□ 12.7
BRD9-216ENST00000518251 BHMT2Q9H2M3 363 aa11.68□□□□□ -0.54
BRD9-216ENST00000518251 STARD7Q9NQZ5 370 aa11.68□□□□□ -0.54
BRD9-216ENST00000518251 TMEM39AQ9NV64 488 aa11.68□□□□□ -0.54
BRD9-216ENST00000518251 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.68□□□□□ -0.54
BRD9-216ENST00000518251 ARID2Q68CP9 1835 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 SYNGAP1Q96PV0 1343 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 IGSF9BQ9UPX0 1349 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 MOXD2PA6NHM9 499 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 SMTNL1A8MU46 457 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 ARIH2O95376 493 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 GGPS1O95749 300 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 SUPT20HL2P0C7V6 817 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 IDEP14735 1019 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 CST5P28325 142 aaPredicted RBP11.67□□□□□ -0.54
BRD9-216ENST00000518251 PBX2P40425 430 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 TPM4P67936 248 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 TTLL4Q14679 1199 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 UGCGQ16739 394 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 METTL7BQ6UX53 244 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 DHX40Q8IX18 779 aaKnown RBP11.67□□□□□ -0.54
BRD9-216ENST00000518251 CCDC65Q8IXS2 484 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 MSL3Q8N5Y2 521 aaKnown RBP11.67□□□□□ -0.54
BRD9-216ENST00000518251 KLHDC9Q8NEP7 349 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 PIGOQ8TEQ8 1089 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 DNAJC19Q96DA6 116 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 CCDC43Q96MW1 224 aaKnown RBP11.67□□□□□ -0.54
BRD9-216ENST00000518251 TSEN34Q9BSV6 310 aaKnown RBP11.67□□□□□ -0.54
BRD9-216ENST00000518251 PBX4Q9BYU1 374 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 DDX41Q9UJV9 622 aaKnown RBP11.67□□□□□ -0.54
BRD9-216ENST00000518251 DBR1Q9UK59 544 aaKnown RBP11.67□□□□□ -0.54
BRD9-216ENST00000518251 GDAQ9Y2T3 454 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 XIRP2A4UGR9 3374 aa11.67□□□□□ -0.54
BRD9-216ENST00000518251 WDR81Q562E7 1941 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 ARHGEF35A5YM69 484 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 BACH1O14867 736 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 IKBKBO14920 756 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 TBCAO75347 108 aaKnown RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 TIMP1P01033 207 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 TXNP10599 105 aaKnown RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 COL9A1P20849 921 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 ERCC5P28715 1186 aaPredicted RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 PPP1R2P41236 205 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 MYL5Q02045 173 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 COASYQ13057 564 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 STIM1Q13586 685 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 LY6KQ17RY6 165 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 CELF3Q5SZQ8 465 aaKnown RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 CCDC62Q6P9F0 684 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 ABHD15Q6UXT9 468 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 CCDC60Q8IWA6 550 aaPredicted RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 SMYD4Q8IYR2 804 aaPredicted RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 ANP32BQ92688 251 aaKnown RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 REEP2Q9BRK0 252 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 KATNBL1Q9H079 304 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 MLXIPQ9HAP2 919 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 PANK4Q9NVE7 773 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 KCND2Q9NZV8 630 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 THEGQ9P2T0 379 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 ZHX1Q9UKY1 873 aaPredicted RBP11.66□□□□□ -0.54
BRD9-216ENST00000518251 CTNND2Q9UQB3 1225 aa11.66□□□□□ -0.54
BRD9-216ENST00000518251 MROH7Q68CQ1 1323 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 CHD9Q3L8U1 2897 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 NPHP3-ACAD11A0A0J9YXS1 232 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 RBM47A0AV96 593 aaKnown RBP11.65□□□□□ -0.54
BRD9-216ENST00000518251 FRMD3A2A2Y4 597 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 DCDC2CA8MYV0 355 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 PPP1R3GB7ZBB8 358 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 ATG7O95352 703 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 SNAI1O95863 264 aaPredicted RBP11.65□□□□□ -0.54
BRD9-216ENST00000518251 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
BRD9-216ENST00000518251 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
BRD9-216ENST00000518251 RARRES1P49788 294 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 CACNB1Q02641 598 aaPredicted RBP11.65□□□□□ -0.54
BRD9-216ENST00000518251 EHHADHQ08426 723 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 PSMD2Q13200 908 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 GIT2Q14161 759 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 KCNA10Q16322 511 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 ARSHQ5FYA8 562 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 TMEM240Q5SV17 173 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 FAM160B1Q5W0V3 765 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 KLHL10Q6JEL2 608 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 MFSD5Q6N075 450 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 RINT1Q6NUQ1 792 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 SWSAP1Q6NVH7 229 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 TAPT1Q6NXT6 567 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 C16orf59Q7L2K0 433 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 FAM126BQ8IXS8 530 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 DHX37Q8IY37 1157 aaKnown RBP11.65□□□□□ -0.54
BRD9-216ENST00000518251 SEPT1Q8WYJ6 367 aa11.65□□□□□ -0.54
BRD9-216ENST00000518251 RUSC1Q9BVN2 902 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms