RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 HOOK3Q86VS8 718 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 ANKS4BQ8N8V4 417 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 LNX1Q8TBB1 728 aaPredicted RBP13.43□□□□□ -0.26
PCM1-203ENST00000517545 LMBR1Q8WVP7 490 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 DDX3YO15523 660 aaKnown RBP13.43□□□□□ -0.26
PCM1-203ENST00000517545 PPP1R11O60927 126 aaPredicted RBP13.43□□□□□ -0.26
PCM1-203ENST00000517545 NEBLO76041 1014 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
PCM1-203ENST00000517545 KCNQ4P56696 695 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 KLRC3Q07444 240 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 SLC29A2Q14542 456 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 CRYMQ14894 314 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 EPHA7Q15375 998 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 NBPF9Q3BBW0 867 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 NSMCE1Q8WV22 266 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 GPR101Q96P66 508 aaPredicted RBP13.43□□□□□ -0.26
PCM1-203ENST00000517545 ERP44Q9BS26 406 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 PABPC3Q9H361 631 aaKnown RBP13.43□□□□□ -0.26
PCM1-203ENST00000517545 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
PCM1-203ENST00000517545 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 POTEIP0CG38 1075 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 PTENP60484 403 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 EDRF1Q3B7T1 1238 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 POTEGQ6S5H5 508 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 POTEEQ6S8J3 1075 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 ZDHHC24Q6UX98 284 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 C16orf86Q6ZW13 317 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 TAX1BP1Q86VP1 789 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 GLYCTKQ8IVS8 523 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 OLIG1Q8TAK6 271 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 SLC35G2Q8TBE7 412 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 CERKQ8TCT0 537 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 NEK9Q8TD19 979 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 CD2APQ9Y5K6 639 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 BAG3O95817 575 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 XRCC5P13010 732 aaKnown RBP13.42□□□□□ -0.26
PCM1-203ENST00000517545 RFC4P35249 363 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 JAM2P57087 298 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 KCNJ2P63252 427 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 CCDC38Q502W7 563 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 DENND2CQ68D51 928 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 SYCE1Q8N0S2 351 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 EPS8L3Q8TE67 593 aaKnown RBP13.42□□□□□ -0.26
PCM1-203ENST00000517545 RAB17Q9H0T7 212 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 SEMA4AQ9H3S1 761 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 INTS9Q9NV88 658 aaKnown RBP13.42□□□□□ -0.26
PCM1-203ENST00000517545 GCNT4Q9P109 453 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 DAAM1Q9Y4D1 1078 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 ASAP2O43150 1006 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 RTN2O75298 545 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 MED24O75448 989 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 NUDT17P0C025 328 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 HOXA7P31268 230 aaPredicted RBP13.42□□□□□ -0.26
PCM1-203ENST00000517545 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 TRPM8Q7Z2W7 1104 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 IKZF4Q9H2S9 585 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 TMOD4Q9NZQ9 345 aa13.42□□□□□ -0.26
PCM1-203ENST00000517545 A0A0A6YYK5 440 aaPredicted RBP13.41□□□□□ -0.26
PCM1-203ENST00000517545 A0A1B0GUA9 196 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 MEIS1O00470 390 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 RGS16O15492 202 aaPredicted RBP13.41□□□□□ -0.26
PCM1-203ENST00000517545 PSMC6P62333 389 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 PPP2R5AQ15172 486 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 FRMD5Q7Z6J6 570 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 C18orf8Q96DM3 657 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 NT5C3AQ9H0P0 336 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 SAMD15Q9P1V8 674 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 RPTORQ8N122 1335 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 CLIC2O15247 247 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 CDC25CP30307 473 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 KCNA1Q09470 495 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 ITIH4Q14624 930 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 HYIQ5T013 277 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 VPS36Q86VN1 386 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 SFR1Q86XK3 245 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 JAMLQ86YT9 394 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 AGAP11Q8TF27 550 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 ALG3Q92685 438 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 ARHGEF26Q96DR7 871 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 PGM2Q96G03 612 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 CCDC113Q9H0I3 377 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
PCM1-203ENST00000517545 EVI5O60447 810 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 UBOX5O94941 541 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 FGFR4P22455 802 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 SMARCA1P28370 1054 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 BTDP43251 543 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 NT5C2P49902 561 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 SLC12A3P55017 1021 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 KNOP1Q1ED39 458 aaKnown RBP13.41□□□□□ -0.26
PCM1-203ENST00000517545 RTFDC1Q9BY42 306 aaPredicted RBP13.41□□□□□ -0.26
PCM1-203ENST00000517545 ANKRD2Q9GZV1 360 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 EBF2Q9HAK2 575 aa13.41□□□□□ -0.26
PCM1-203ENST00000517545 TTC7AQ9ULT0 858 aaPredicted RBP13.41□□□□□ -0.26
PCM1-203ENST00000517545 IRS2Q9Y4H2 1338 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 KIAA0391O15091 583 aaKnown RBP13.4□□□□□ -0.26
PCM1-203ENST00000517545 ANP32DO95626 131 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 PPP4CP60510 307 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 KIAA1755Q5JYT7 1200 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms