RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 AURKAO14965 403 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 TRIM24O15164 1050 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 RECQL4O94761 1208 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 DDNO94850 711 aaPredicted RBP0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 TBX6O95947 436 aaPredicted RBP0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 HMGCRP04035 888 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 RAG1P15918 1043 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 TFE3P19532 575 aaPredicted RBP0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 BMPR1AP36894 532 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 SUPT20HL1Q3ZLR7 823 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 MROH9Q5TGP6 573 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 CYB5RLQ6IPT4 315 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 FAM111BQ6SJ93 734 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 SV2BQ7L1I2 683 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 C7orf61Q8IZ16 206 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 NRACQ8N912 160 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 MDGA1Q8NFP4 955 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 RABGGTAQ92696 567 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 ZNF524Q96C55 264 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 CAMK1GQ96NX5 476 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 QTRT1Q9BXR0 403 aaKnown RBP0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 OSBPL7Q9BZF2 842 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 MIR1-1HGQ9H1L0 117 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 KCNH6Q9H252 994 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 VPS16Q9H269 839 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 AKIP1Q9NQ31 210 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 BTG4Q9NY30 223 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 PCDHB4Q9Y5E5 795 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 ADAMTS9Q9P2N4 1935 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 NPHP3-ACAD11A0A0J9YXS1 232 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 CD8B2A6NJW9 211 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 C9IYK1 514 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 STXBP3O00186 592 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 SLC28A2O43868 658 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 OAZ2O95190 189 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 TGFB3P10600 412 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 GYPEP15421 78 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 PAMP19021 973 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 EPHB2P29323 1055 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 RGS3P49796 1198 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 HNRNPKP61978 463 aaKnown RBP eCLIP0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 BLOC1S1P78537 153 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 IRF9Q00978 393 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 GUCY1B3Q02153 619 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 FKBP4Q02790 459 aaKnown RBP eCLIP0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 SCAPQ12770 1279 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 GRM1Q13255 1194 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 EIF4HQ15056 248 aaKnown RBP0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 NPY5RQ15761 445 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 AKNAD1Q5T1N1 836 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 PIK3R6Q5UE93 754 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 RHBDF2Q6PJF5 856 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 SLC2A7Q6PXP3 512 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 MYPOPQ86VE0 399 aaPredicted RBP0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 CPEB3Q8NE35 698 aaKnown RBP0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 SARAFQ96BY9 339 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 THOC3Q96J01 351 aaKnown RBP0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 VCPIP1Q96JH7 1222 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 UROC1Q96N76 676 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 FAM193BQ96PV7 902 aaPredicted RBP0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 TMEM79Q9BSE2 394 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 HERPUD2Q9BSE4 406 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 TRMT13Q9NUP7 481 aaKnown RBP0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 ADAMTS1Q9UHI8 967 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 CDC42EP3Q9UKI2 254 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 X6R8D5 127 aa0.25□□□□□ -2.37
RNU6-542P-201ENST00000516405 FAM221AA4D161 298 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 ZNF839A8K0R7 811 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 SPDEFO95238 335 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 LDLRP01130 860 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 ENO2P09104 434 aaPredicted RBP0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 ITGAMP11215 1152 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 HK1P19367 917 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 WT1P19544 449 aaPredicted RBP0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 MPGP29372 298 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 NPEPPSP55786 919 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 ADAM8P78325 824 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 GRIN1Q05586 938 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 INF2Q27J81 1249 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 MST1LQ2TV78 715 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 EMC4Q5J8M3 183 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 CD276Q5ZPR3 534 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 STEAP3Q658P3 488 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 E4F1Q66K89 784 aaPredicted RBP0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 FCRLBQ6BAA4 426 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 KRTAP5-10Q6L8G5 202 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 ZNF66Q6ZN08 573 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 NLRP10Q86W26 655 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 SPAG16Q8N0X2 631 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 Q8N1Y9 231 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 CLEC4DQ8WXI8 215 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 FAM84BQ96KN1 310 aaPredicted RBP0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 ZNF512Q96ME7 567 aaPredicted RBP0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 ZDHHC15Q96MV8 337 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 SLC6A18Q96N87 628 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 GPHA2Q96T91 129 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 TIMP4Q99727 224 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 SH2D3AQ9BRG2 576 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 TEX101Q9BY14 249 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 HAPLN2Q9GZV7 340 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms