RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 SF3A1Q15459 793 aaKnown RBP4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 C2orf27AQ580R0 203 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 CATSPEREQ5SY80 951 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 FSTL4Q6MZW2 842 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 CC2D1AQ6P1N0 951 aaPredicted RBP4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 DDX53Q86TM3 631 aaKnown RBP4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 OR14K1Q8NGZ2 314 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 EXTL1Q92935 676 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 LPPQ93052 612 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 FOXB1Q99853 325 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 CSRNP2Q9H175 543 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 PLD2O14939 933 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 STAT5BP51692 787 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 ALDH6A1Q02252 535 aaKnown RBP4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 PTH1RQ03431 593 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 ABHD18Q0P651 414 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 FOXL1Q12952 345 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 GRM7Q14831 915 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 ABHD17CQ6PCB6 329 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 OTOP1Q7RTM1 612 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 FGD2Q7Z6J4 655 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 C1orf210Q8IVY1 113 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 SHCBP1Q8NEM2 672 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 ERCC4Q92889 916 aaPredicted RBP4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 NCOA5Q9HCD5 579 aaKnown RBP4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 TRIM39Q9HCM9 518 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 PODXL2Q9NZ53 605 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 PTCH2Q9Y6C5 1203 aa4.48□□□□□ -1.69
RNU4-49P-201ENST00000516080 PLSCR1O15162 318 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 H2AFYO75367 372 aaKnown RBP4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 ZNF202O95125 648 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 ZBTB48P10074 688 aaPredicted RBP4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 HIBADHP31937 336 aaKnown RBP4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 FNTBP49356 437 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 ROM1Q03395 351 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 KLF10Q13118 480 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 LSM12Q3MHD2 195 aaKnown RBP4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 KLHDC10Q6PID8 442 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 RTN4RL1Q86UN2 441 aaPredicted RBP4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 SGMS1Q86VZ5 419 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 GPR135Q8IZ08 494 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 THEMISQ8N1K5 641 aaPredicted RBP4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 D2HGDHQ8N465 521 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 ZNF808Q8N4W9 903 aaPredicted RBP4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 MPHOSPH9Q99550 1183 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 SLITRK6Q9H5Y7 841 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 ACSS2Q9NR19 701 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 TLR9Q9NR96 1032 aa4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 SAE1Q9UBE0 346 aaPredicted RBP4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 CTDP1Q9Y5B0 961 aaPredicted RBP4.47□□□□□ -1.69
RNU4-49P-201ENST00000516080 CYP27B1O15528 508 aa4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 MCM7P33993 719 aa4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 MECP2P51608 486 aaKnown RBP4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 TGFB2P61812 414 aa4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 ZCCHC8Q6NZY4 707 aaKnown RBP4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 IL17DQ8TAD2 202 aa4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 PMFBP1Q8TBY8 1022 aa4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 RABGGTAQ92696 567 aa4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 GFM2Q969S9 779 aaKnown RBP4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 FOXRED1Q96CU9 486 aaPredicted RBP4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 PLEKHG4BQ96PX9 1271 aa4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 GIT1Q9Y2X7 761 aa4.46□□□□□ -1.7
RNU4-49P-201ENST00000516080 A0A1W2PRX2 142 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 M0R2C6 588 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 NARSO43776 548 aaKnown RBP4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 ASLP04424 464 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 CYP17A1P05093 508 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 IGFALSP35858 605 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 KIF11P52732 1056 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 ADAM15Q13444 863 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 RIN1Q13671 783 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 FHL2Q14192 279 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 NFE2L2Q16236 605 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 FNDC3BQ53EP0 1204 aaKnown RBP4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 NME9Q86XW9 330 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 BCL6BQ8N143 479 aaPredicted RBP4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 ANKRD35Q8N283 1001 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 LILRB2Q8N423 598 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 AMER2Q8N7J2 671 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 CHST14Q8NCH0 376 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 CACTINQ8WUQ7 758 aaKnown RBP4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 GCDHQ92947 438 aaPredicted RBP4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 SLC7A6OSQ96CW6 309 aaPredicted RBP4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 TMEM176AQ96HP8 235 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 MENTQ9BUN1 341 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 OSBPL2Q9H1P3 480 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 SLC6A15Q9H2J7 730 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 PCIF1Q9H4Z3 704 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 ZNF703Q9H7S9 590 aaPredicted RBP4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 AGO3Q9H9G7 860 aaKnown RBP4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 CABP5Q9NP86 173 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 SAMD15Q9P1V8 674 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 ING1Q9UK53 422 aaPredicted RBP4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 DENND2AQ9ULE3 1009 aa4.45□□□□□ -1.7
RNU4-49P-201ENST00000516080 CAPN14A8MX76 684 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 KRT37O76014 449 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 RAPGEF3O95398 923 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 PRLP01236 227 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 C1SP09871 688 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 ADCY7P51828 1080 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms