RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 NEK11Q8NG66 645 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGCR-213ENST00000515776 CCDC140Q96MF4 163 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 AGAP3Q96P47 875 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 CDK5RAP1Q96SZ6 601 aaKnown RBP4.55□□□□□ -1.68
HMGCR-213ENST00000515776 ZNF747Q9BV97 191 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 ACBD3Q9H3P7 528 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 PRKRIP1Q9H875 184 aaPredicted RBP4.55□□□□□ -1.68
HMGCR-213ENST00000515776 RMI1Q9H9A7 625 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 CLDND1Q9NY35 253 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 RBPJLQ9UBG7 517 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 FTSJ1Q9UET6 329 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 STRIP2Q9ULQ0 834 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 FRMD4BQ9Y2L6 1034 aa4.55□□□□□ -1.68
HMGCR-213ENST00000515776 RPGRIP1LQ68CZ1 1315 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 EME2A4GXA9 379 aaPredicted RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 U2SURPO15042 1029 aaKnown RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 DGKIO75912 1065 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 CDKL5O76039 1030 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 SNUPNO95149 360 aaKnown RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 LTBRP36941 435 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 CCDC15Q0P6D6 951 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 NFATC3Q12968 1075 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 TESK1Q15569 626 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 EMC4Q5J8M3 183 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 ACBD5Q5T8D3 534 aaPredicted RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 TRMT10BQ6PF06 316 aaKnown RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 KCNV1Q6PIU1 500 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 LEKR1Q6ZMV7 388 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 CLEC17AQ6ZS10 378 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 NOL8Q76FK4 1167 aaKnown RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 CCDC186Q7Z3E2 898 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 FAM178BQ8IXR5 827 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 KLHL36Q8N4N3 616 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 TMEM145Q8NBT3 493 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 ZNF483Q8TF39 744 aaPredicted RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 SNRNP27Q8WVK2 155 aaKnown RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 PPM1EQ8WY54 764 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 WWC2-AS2Q96NR7 200 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 GBP4Q96PP9 640 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 TMEM209Q96SK2 561 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 C22orf23Q9BZE7 217 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 VPS11Q9H270 941 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 CWC25Q9NXE8 425 aaPredicted RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 RCAN3Q9UKA8 241 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 INPP5FQ9Y2H2 1132 aa4.54□□□□□ -1.68
HMGCR-213ENST00000515776 LRRFIP2Q9Y608 721 aaKnown RBP4.54□□□□□ -1.68
HMGCR-213ENST00000515776 B2RBV5 119 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 CYR61O00622 381 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 SMAD7O15105 426 aaKnown RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 ZRANB2O95218 330 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 FAM200BP0CF97 657 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 ELF1P32519 619 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 CCNHP51946 323 aaPredicted RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 RBM6P78332 1123 aaKnown RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 IFT88Q13099 833 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 PDIA5Q14554 519 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 PDCD2Q16342 344 aaPredicted RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 KLHL40Q2TBA0 621 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 CCDC178Q5BJE1 867 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 TEX35Q5T0J7 233 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 PHF19Q5T6S3 580 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 HHATQ5VTY9 493 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 CCDC30Q5VVM6 783 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 LARP1BQ659C4 914 aaKnown RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 SLFN13Q68D06 897 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 MYLK4Q86YV6 388 aaPredicted RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 TEX11Q8IYF3 940 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 GOLGA5Q8TBA6 731 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 MICAL1Q8TDZ2 1067 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 SNX21Q969T3 373 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 BAG1Q99933 345 aaPredicted RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 SMOC1Q9H4F8 434 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 EPB41L1Q9H4G0 881 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 ZSCAN16Q9H4T2 348 aaPredicted RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 BARX1Q9HBU1 254 aaPredicted RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 A1CFQ9NQ94 594 aaKnown RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 GNL3LQ9NVN8 582 aaKnown RBP4.53□□□□□ -1.68
HMGCR-213ENST00000515776 MYOTQ9UBF9 498 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 FHAD1B1AJZ9 1412 aa4.53□□□□□ -1.68
HMGCR-213ENST00000515776 MAP3K1Q13233 1512 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 CCDC88BA6NC98 1476 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 SMTNL1A8MU46 457 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 PATE3B3GLJ2 98 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 OVOL3O00110 214 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 IPO5O00410 1097 aaKnown RBP4.52□□□□□ -1.69
HMGCR-213ENST00000515776 SUSD5O60279 629 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 FZD7O75084 574 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 ZNF623O75123 536 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 RTN2O75298 545 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 PPFIA4O75335 1185 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 COL6A1P12109 1028 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 GCFC2P16383 781 aaKnown RBP4.52□□□□□ -1.69
HMGCR-213ENST00000515776 ATF4P18848 351 aaPredicted RBP4.52□□□□□ -1.69
HMGCR-213ENST00000515776 PRPHP41219 470 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 GFRA1P56159 465 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 R3HDM1Q15032 1099 aaKnown RBP4.52□□□□□ -1.69
HMGCR-213ENST00000515776 ZSCAN23Q3MJ62 389 aa4.52□□□□□ -1.69
HMGCR-213ENST00000515776 ELOA2Q8IYF1 753 aaPredicted RBP4.52□□□□□ -1.69
HMGCR-213ENST00000515776 C17orf53Q8N3J3 647 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms