RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CDC45O75419 566 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 ASMTLO95671 621 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 C4BPAP04003 597 aaKnown RBP4.76□□□□□ -1.65
HERC4-215ENST00000515753 HMGCRP04035 888 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 SRGAP2CP0DJJ0 459 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 KRT15P19012 456 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 POU3F2P20265 443 aaPredicted RBP4.76□□□□□ -1.65
HERC4-215ENST00000515753 SDHAP31040 664 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 HIBADHP31937 336 aaKnown RBP4.76□□□□□ -1.65
HERC4-215ENST00000515753 MC4RP32245 332 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 MSX2P35548 267 aaPredicted RBP4.76□□□□□ -1.65
HERC4-215ENST00000515753 ETV4P43268 484 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 INHBEP58166 350 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 DPTQ07507 201 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 PABPC4Q13310 644 aaKnown RBP eCLIP4.76□□□□□ -1.65
HERC4-215ENST00000515753 ARHGAP44Q17R89 818 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 FNDC7Q5VTL7 733 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 KIAA0907Q7Z7F0 614 aaPredicted RBP4.76□□□□□ -1.65
HERC4-215ENST00000515753 DDX53Q86TM3 631 aaKnown RBP4.76□□□□□ -1.65
HERC4-215ENST00000515753 OSTM1Q86WC4 334 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 PTRH1Q86Y79 214 aaKnown RBP4.76□□□□□ -1.65
HERC4-215ENST00000515753 CFHR4Q92496 578 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 DLG3Q92796 817 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 SCYL1Q96KG9 808 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 ZDHHC5Q9C0B5 715 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 MMRN2Q9H8L6 949 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 TLR9Q9NR96 1032 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 COQ6Q9Y2Z9 468 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 B3GALT1Q9Y5Z6 326 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 MRPL42Q9Y6G3 142 aaKnown RBP4.76□□□□□ -1.65
HERC4-215ENST00000515753 MAFO75444 373 aaPredicted RBP4.75□□□□□ -1.65
HERC4-215ENST00000515753 ACRV1P26436 265 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 AOAHP28039 575 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 DNM2P50570 870 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 PLEKHG4Q58EX7 1191 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 FILIP1Q7Z7B0 1213 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 CISD2Q8N5K1 135 aaKnown RBP4.75□□□□□ -1.65
HERC4-215ENST00000515753 CACTINQ8WUQ7 758 aaKnown RBP4.75□□□□□ -1.65
HERC4-215ENST00000515753 NINJ1Q92982 152 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 BOCQ9BWV1 1114 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 INCENPQ9NQS7 918 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 KCNH7Q9NS40 1196 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 FANCLQ9NW38 375 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 PLA2G3Q9NZ20 509 aa4.75□□□□□ -1.65
HERC4-215ENST00000515753 PUF60Q9UHX1 559 aaKnown RBP4.75□□□□□ -1.65
HERC4-215ENST00000515753 A0A087X1B8 175 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 LOC105371045A0A1W2PR82 267 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 SLC12A8A0AV02 714 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 PRAMEF25A6NGN4 478 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 GLRX3O76003 335 aaKnown RBP4.74□□□□□ -1.65
HERC4-215ENST00000515753 PTGS1P23219 599 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 FLT3P36888 993 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 RPS19P39019 145 aaKnown RBP4.74□□□□□ -1.65
HERC4-215ENST00000515753 TUBA3CQ13748 450 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 PCOLCEQ15113 449 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 TKFCQ3LXA3 575 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 TUBA3EQ6PEY2 450 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 LRSAM1Q6UWE0 723 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 USP30Q70CQ3 517 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 OTOP2Q7RTS6 562 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 KIF18BQ86Y91 864 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 GPR135Q8IZ08 494 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 IGSF22Q8N9C0 903 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 CHST14Q8NCH0 376 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 OR14K1Q8NGZ2 314 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 TMEM176AQ96HP8 235 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 GALNT8Q9NY28 637 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 SAMD15Q9P1V8 674 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 BTBD7Q9P203 1132 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 USP35Q9P2H5 1018 aa4.74□□□□□ -1.65
HERC4-215ENST00000515753 TNPO3Q9Y5L0 923 aaKnown RBP4.74□□□□□ -1.65
HERC4-215ENST00000515753 FAM83GA6ND36 823 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 OPA1O60313 960 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 ZBTB48P10074 688 aaPredicted RBP4.73□□□□□ -1.65
HERC4-215ENST00000515753 SDSP20132 328 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 FNTBP49356 437 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 MRE11P49959 708 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 CD83Q01151 205 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 NFYCQ13952 458 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 ZNF460Q14592 562 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 SEC23AQ15436 765 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 STILQ15468 1287 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 FSTL4Q6MZW2 842 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 EP400NLQ6ZTU2 488 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 SGMS1Q86VZ5 419 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 AMER2Q8N7J2 671 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 LARP4BQ92615 738 aaKnown RBP4.73□□□□□ -1.65
HERC4-215ENST00000515753 UCKL1Q9NWZ5 548 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 HECAQ9UBI9 543 aaPredicted RBP4.73□□□□□ -1.65
HERC4-215ENST00000515753 ASB1Q9Y576 335 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 CD2APQ9Y5K6 639 aa4.73□□□□□ -1.65
HERC4-215ENST00000515753 M0R2C6 588 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 CBX4O00257 560 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 HIP1RO75146 1068 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 MPIG6BO95866 241 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 INHBCP55103 352 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 NANOS3P60323 173 aaKnown RBP4.72□□□□□ -1.65
HERC4-215ENST00000515753 IRF9Q00978 393 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 GRM7Q14831 915 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 EIF4HQ15056 248 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms