RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 NPEPPSP55786 919 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 GRIN1Q05586 938 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 FPGSQ05932 587 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 PPIGQ13427 754 aaKnown RBP eCLIP13.27□□□□□ -0.294e-7■■□□□ 12.4
SNF8-215ENST00000515572 FAM26DQ5JW98 314 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 KIAA0319LQ8IZA0 1049 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 LINC01465Q8N7H1 131 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 PIGOQ8TEQ8 1089 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 ZBTB10Q96DT7 871 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 SPATA32Q96LK8 384 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 MAP7D2Q96T17 732 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 FAM49AQ9H0Q0 323 aaPredicted RBP13.27□□□□□ -0.29
SNF8-215ENST00000515572 DHX33Q9H6R0 707 aaKnown RBP13.27□□□□□ -0.29
SNF8-215ENST00000515572 SUGCTQ9HAC7 445 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 DNM3Q9UQ16 869 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 ARHGEF35A5YM69 484 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 ZBTB39O15060 712 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 EYA4O95677 639 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 PFKMP08237 780 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 MAGEA10P43363 369 aaPredicted RBP13.26□□□□□ -0.29
SNF8-215ENST00000515572 MRPS6P82932 125 aaKnown RBP13.26□□□□□ -0.29
SNF8-215ENST00000515572 CDC42EP1Q00587 391 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 ZRSR1Q15695 479 aaKnown RBP13.26□□□□□ -0.29
SNF8-215ENST00000515572 ECM1Q16610 540 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 PRPF38BQ5VTL8 546 aaKnown RBP13.26□□□□□ -0.29
SNF8-215ENST00000515572 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 RPUSD2Q8IZ73 545 aaKnown RBP13.26□□□□□ -0.29
SNF8-215ENST00000515572 RASSF8Q8NHQ8 419 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 TCP11Q8WWU5 503 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 SYMPKQ92797 1274 aaKnown RBP13.26□□□□□ -0.29
SNF8-215ENST00000515572 CLIC6Q96NY7 704 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 PNMA5Q96PV4 448 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 MTRQ99707 1265 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 SH2D3AQ9BRG2 576 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 ATP6V0A4Q9HBG4 840 aa13.26□□□□□ -0.29
SNF8-215ENST00000515572 CSF2RAP15509 400 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 CLCN3P51790 818 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 MDM2Q00987 491 aaPredicted RBP13.25□□□□□ -0.29
SNF8-215ENST00000515572 MGAT3Q09327 533 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 GRB10Q13322 594 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 EMC2Q15006 297 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 TMEM119Q4V9L6 283 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 LRRC71Q8N4P6 559 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 USP38Q8NB14 1042 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 MCPH1Q8NEM0 835 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 LEO1Q8WVC0 666 aaPredicted RBP13.25□□□□□ -0.29
SNF8-215ENST00000515572 SCLYQ96I15 445 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 EPSTI1Q96J88 318 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 GDF15Q99988 308 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 CELF4Q9BZC1 486 aaKnown RBP13.25□□□□□ -0.29
SNF8-215ENST00000515572 BHMT2Q9H2M3 363 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 IL23AQ9NPF7 189 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 STK17AQ9UEE5 414 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 AKT3Q9Y243 479 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 TRPV2Q9Y5S1 764 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 CDY2AQ9Y6F7 541 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 SQORQ9Y6N5 450 aa13.25□□□□□ -0.29
SNF8-215ENST00000515572 E9PMD0 336 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 ASAP2O43150 1006 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 CHRNA1P02708 482 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 CTSHP09668 335 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 CYP11B2P19099 503 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 PLCG1P19174 1290 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 BMP8BP34820 402 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 KARSQ15046 597 aaKnown RBP13.24□□□□□ -0.29
SNF8-215ENST00000515572 SPECC1Q5M775 1068 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 AXDND1Q5T1B0 1012 aaPredicted RBP13.24□□□□□ -0.29
SNF8-215ENST00000515572 PADI6Q6TGC4 694 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 CCDC73Q6ZRK6 1079 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 FAM43BQ6ZT52 329 aaPredicted RBP13.24□□□□□ -0.29
SNF8-215ENST00000515572 USP49Q70CQ1 688 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 PSPC1Q8WXF1 523 aaKnown RBP13.24□□□□□ -0.29
SNF8-215ENST00000515572 KCND2Q9NZV8 630 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
SNF8-215ENST00000515572 PCDHA7Q9UN72 937 aa13.24□□□□□ -0.29
SNF8-215ENST00000515572 CEP290O15078 2479 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 A0A087WWV3 80 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
SNF8-215ENST00000515572 CXCL10P02778 98 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 VTNP04004 478 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 CRYBB1P53674 252 aaPredicted RBP13.23□□□□□ -0.29
SNF8-215ENST00000515572 TMEM62Q0P6H9 643 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
SNF8-215ENST00000515572 MXD4Q14582 209 aaPredicted RBP13.23□□□□□ -0.29
SNF8-215ENST00000515572 RRAGBQ5VZM2 374 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 ADALQ6DHV7 355 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 PSRC1Q6PGN9 363 aaPredicted RBP13.23□□□□□ -0.29
SNF8-215ENST00000515572 KCNK18Q7Z418 384 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 ZNF410Q86VK4 478 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 SYT2Q8N9I0 419 aaPredicted RBP13.23□□□□□ -0.29
SNF8-215ENST00000515572 PLIN2Q99541 437 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
SNF8-215ENST00000515572 TIPINQ9BVW5 301 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 UBE2OQ9C0C9 1292 aaKnown RBP13.23□□□□□ -0.29
SNF8-215ENST00000515572 XPNPEP1Q9NQW7 623 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 FAM13BQ9NYF5 915 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 MYH11P35749 1972 aa13.23□□□□□ -0.29
SNF8-215ENST00000515572 NBNO60934 754 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms