RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.9□□□□□ -0.342e-6■■■□□ 16.7
SUB1-213ENST00000515355 ANO5Q75V66 913 aa12.9□□□□□ -0.34
SUB1-213ENST00000515355 OTUD6AQ7L8S5 288 aa12.9□□□□□ -0.34
SUB1-213ENST00000515355 ERMNQ8TAM6 284 aa12.9□□□□□ -0.34
SUB1-213ENST00000515355 FOXD4L4Q8WXT5 416 aaPredicted RBP12.9□□□□□ -0.34
SUB1-213ENST00000515355 TIFAQ96CG3 184 aa12.9□□□□□ -0.34
SUB1-213ENST00000515355 OSMRQ99650 979 aa12.9□□□□□ -0.34
SUB1-213ENST00000515355 PBX4Q9BYU1 374 aa12.9□□□□□ -0.34
SUB1-213ENST00000515355 NKX2-4Q9H2Z4 354 aa12.9□□□□□ -0.34
SUB1-213ENST00000515355 CDHR5Q9HBB8 845 aa12.9□□□□□ -0.34
SUB1-213ENST00000515355 SLITRK3O94933 977 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 SYT1P21579 422 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 DNM2P50570 870 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
SUB1-213ENST00000515355 NLRP11P59045 1033 aaKnown RBP12.89□□□□□ -0.35
SUB1-213ENST00000515355 SPIRE1Q08AE8 756 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 MGAT3Q09327 533 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 PAK2Q13177 524 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 RILPL1Q5EBL4 403 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 FBXO47Q5MNV8 452 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 RPAINQ86UA6 219 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
SUB1-213ENST00000515355 PIGOQ8TEQ8 1089 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 NLRP7Q8WX94 980 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 SNX21Q969T3 373 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 SLC9A7Q96T83 725 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 NIFKQ9BYG3 293 aaKnown RBP12.89□□□□□ -0.35
SUB1-213ENST00000515355 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
SUB1-213ENST00000515355 TLL1O43897 1013 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 EFCAB14O75071 495 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 RPS6KA5O75582 802 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 STBD1O95210 358 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 AMHP03971 560 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 CCT6AP40227 531 aaKnown RBP12.88□□□□□ -0.35
SUB1-213ENST00000515355 ORC2Q13416 577 aaPredicted RBP12.88□□□□□ -0.35
SUB1-213ENST00000515355 DRP2Q13474 957 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 RAB30Q15771 203 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 DTHD1Q6ZMT9 781 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 RHPN2Q8IUC4 686 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 HERC6Q8IVU3 1022 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 C4orf19Q8IY42 314 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 SLC7A3Q8WY07 619 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 APBB2Q92870 758 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 INTS4Q96HW7 963 aaKnown RBP12.88□□□□□ -0.35
SUB1-213ENST00000515355 AGO3Q9H9G7 860 aaKnown RBP12.88□□□□□ -0.35
SUB1-213ENST00000515355 CERS4Q9HA82 394 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 SLC28A3Q9HAS3 691 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
SUB1-213ENST00000515355 LRWD1Q9UFC0 647 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 PADI3Q9ULW8 664 aa12.88□□□□□ -0.35
SUB1-213ENST00000515355 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
SUB1-213ENST00000515355 CSDE1O75534 798 aaKnown RBP12.87□□□□□ -0.35
SUB1-213ENST00000515355 CEBPZQ03701 1054 aaKnown RBP12.87□□□□□ -0.35
SUB1-213ENST00000515355 TARBP2Q15633 366 aaKnown RBP12.87□□□□□ -0.35
SUB1-213ENST00000515355 PPP2R2DQ66LE6 453 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 C4orf32Q8N8J7 132 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 PHOSPHO2Q8TCD6 241 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 HSD17B14Q9BPX1 270 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 RAB34Q9BZG1 259 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 SEMA6BQ9H3T3 888 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 ZNF576Q9H609 170 aa12.87□□□□□ -0.35
SUB1-213ENST00000515355 NOC2LQ9Y3T9 749 aaKnown RBP12.87□□□□□ -0.35
SUB1-213ENST00000515355 TET1Q8NFU7 2136 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 DENND3A2RUS2 1198 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 VWA3AA6NCI4 1184 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 PP2D1A8MPX8 630 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 GPR32O75388 356 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 MAFO75444 373 aaPredicted RBP12.86□□□□□ -0.35
SUB1-213ENST00000515355 MED24O75448 989 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 CA3P07451 260 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 SRGAP2CP0DJJ0 459 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 FGFR4P22455 802 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 CDC25AP30304 524 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 CRYBB1P53674 252 aaPredicted RBP12.86□□□□□ -0.35
SUB1-213ENST00000515355 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
SUB1-213ENST00000515355 FAM173BQ6P4H8 233 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
SUB1-213ENST00000515355 BRAPQ7Z569 592 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 CATSPER3Q86XQ3 398 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 KSR1Q8IVT5 923 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 USP38Q8NB14 1042 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 SNX29Q8TEQ0 813 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 JPH2Q9BR39 696 aaPredicted RBP12.86□□□□□ -0.35
SUB1-213ENST00000515355 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.86□□□□□ -0.35
SUB1-213ENST00000515355 ST3GAL5Q9UNP4 418 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 PCDHA11Q9Y5I1 949 aa12.86□□□□□ -0.35
SUB1-213ENST00000515355 MYH9P35579 1960 aaKnown RBP12.86□□□□□ -0.35
SUB1-213ENST00000515355 SZT2Q5T011 3432 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 A0A087WZ62 844 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.85□□□□□ -0.35
SUB1-213ENST00000515355 LAD1O00515 517 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 ENPP3O14638 875 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 GPR182O15218 404 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 STX6O43752 255 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms