RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 IGKV6-21A0A0C4DH24 114 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 GAS2O43903 313 aaKnown RBP23.33■■□□□ 1.33
LSM6-207ENST00000515311 CYP11B2P19099 503 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 EN2P19622 333 aaPredicted RBP23.33■■□□□ 1.33
LSM6-207ENST00000515311 CDK7P50613 346 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 IGBP1P78318 339 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 SNX17Q15036 470 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 RINT1Q6NUQ1 792 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 MTHFD1LQ6UB35 978 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 C1orf186Q6ZWK4 172 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 GPBP1Q86WP2 473 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 ELOA2Q8IYF1 753 aaPredicted RBP23.33■■□□□ 1.33
LSM6-207ENST00000515311 RETREG2Q8NC44 543 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 MCPH1Q8NEM0 835 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 PAWRQ96IZ0 340 aaKnown RBP23.33■■□□□ 1.33
LSM6-207ENST00000515311 RUSC1Q9BVN2 902 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 TIPINQ9BVW5 301 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 ATP6V0A4Q9HBG4 840 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 PDLIM7Q9NR12 457 aa23.33■■□□□ 1.33
LSM6-207ENST00000515311 USO1O60763 962 aaKnown RBP23.32■■□□□ 1.32
LSM6-207ENST00000515311 MYL1P05976 194 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 GUCY2CP25092 1073 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 KLRC1P26715 233 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 HIC1Q14526 733 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 DHX8Q14562 1220 aaKnown RBP23.32■■□□□ 1.32
LSM6-207ENST00000515311 EMC2Q15006 297 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 ARSHQ5FYA8 562 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 GDF6Q6KF10 455 aaPredicted RBP23.32■■□□□ 1.32
LSM6-207ENST00000515311 CNNM4Q6P4Q7 775 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 SH3RF1Q7Z6J0 888 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 TNS4Q8IZW8 715 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 PPP1R13LQ8WUF5 828 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 PAGE5Q96GU1 130 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 MTRQ99707 1265 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 MROH7Q68CQ1 1323 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 EVPLQ92817 2033 aa23.32■■□□□ 1.32
LSM6-207ENST00000515311 NFKBIBQ15653 356 aa23.31■■□□□ 1.32
LSM6-207ENST00000515311 SLC39A5Q6ZMH5 540 aa23.31■■□□□ 1.32
LSM6-207ENST00000515311 BMP2KQ9NSY1 1161 aaPredicted RBP23.31■■□□□ 1.32
LSM6-207ENST00000515311 HOOK1Q9UJC3 728 aaKnown RBP23.31■■□□□ 1.32
LSM6-207ENST00000515311 PCDHA2Q9Y5H9 948 aa23.31■■□□□ 1.32
LSM6-207ENST00000515311 MYMKA6NI61 221 aa23.3■■□□□ 1.32
LSM6-207ENST00000515311 LINC01465Q8N7H1 131 aa23.3■■□□□ 1.32
LSM6-207ENST00000515311 C7orf25Q9BPX7 421 aa23.3■■□□□ 1.32
LSM6-207ENST00000515311 TRIM9Q9C026 710 aa23.3■■□□□ 1.32
LSM6-207ENST00000515311 XPNPEP1Q9NQW7 623 aa23.3■■□□□ 1.32
LSM6-207ENST00000515311 ODF2LQ9ULJ1 636 aa23.3■■□□□ 1.32
LSM6-207ENST00000515311 MYH11P35749 1972 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 SMIM35A0A1B0GVV1 85 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 TREHO43280 583 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 AFMP43652 599 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 DNM2P50570 870 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 PTGISQ16647 500 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 TAF2Q6P1X5 1199 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 ANKRD33Q7Z3H0 272 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 SERINC5Q86VE9 423 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 TCP11Q8WWU5 503 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 DDX12PQ92771 950 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 STAMQ92783 540 aa23.29■■□□□ 1.32
LSM6-207ENST00000515311 GTPBP6O43824 516 aaPredicted RBP23.28■■□□□ 1.32
LSM6-207ENST00000515311 RPLP2P05387 115 aaKnown RBP23.28■■□□□ 1.32
LSM6-207ENST00000515311 KRT18P05783 430 aaKnown RBP23.28■■□□□ 1.32
LSM6-207ENST00000515311 TMOD1P28289 359 aa23.28■■□□□ 1.32
LSM6-207ENST00000515311 ZNF200P98182 395 aaPredicted RBP23.28■■□□□ 1.32
LSM6-207ENST00000515311 MDM2Q00987 491 aaPredicted RBP23.28■■□□□ 1.32
LSM6-207ENST00000515311 EFCAB12Q6NXP0 572 aa23.28■■□□□ 1.32
LSM6-207ENST00000515311 FAM126BQ8IXS8 530 aa23.28■■□□□ 1.32
LSM6-207ENST00000515311 GRAMD1CQ8IYS0 662 aa23.28■■□□□ 1.32
LSM6-207ENST00000515311 METTL13Q8N6R0 699 aa23.28■■□□□ 1.32
LSM6-207ENST00000515311 KIFAP3Q92845 792 aa23.28■■□□□ 1.32
LSM6-207ENST00000515311 DRC1Q96MC2 740 aa23.28■■□□□ 1.32
LSM6-207ENST00000515311 CTAGE1Q96RT6 745 aa23.28■■□□□ 1.32
LSM6-207ENST00000515311 REEP2Q9BRK0 252 aa23.28■■□□□ 1.32
LSM6-207ENST00000515311 TRMT13Q9NUP7 481 aaKnown RBP23.28■■□□□ 1.32
LSM6-207ENST00000515311 B4GALT4O60513 344 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 CYP2C9P11712 490 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 ATN1P54259 1190 aaPredicted RBP23.27■■□□□ 1.32
LSM6-207ENST00000515311 PTK7Q13308 1070 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 MKRN4PQ13434 485 aaPredicted RBP23.27■■□□□ 1.32
LSM6-207ENST00000515311 GIT2Q14161 759 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 POSTNQ15063 836 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 KLHL40Q2TBA0 621 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 SKOR2Q2VWA4 1001 aaPredicted RBP23.27■■□□□ 1.32
LSM6-207ENST00000515311 IER5Q5VY09 327 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 LRRC71Q8N4P6 559 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 DNAJC19Q96DA6 116 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 ZBTB10Q96DT7 871 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 TOX2Q96NM4 488 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 TRPV6Q9H1D0 765 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 CLSTN2Q9H4D0 955 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 SUGCTQ9HAC7 445 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 NOD1Q9Y239 953 aa23.27■■□□□ 1.32
LSM6-207ENST00000515311 NPHP3-ACAD11A0A0J9YXS1 232 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 HIP1RO75146 1068 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 CD4P01730 458 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 RTP1P59025 263 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 MAPK7Q13164 816 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 CUL4BQ13620 913 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 FAM102BQ5T8I3 360 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 RUFY4Q6ZNE9 571 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms