RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 KIZQ2M2Z5 673 aa17.05■□□□□ 0.32
DDR1-278ENST00000515233 SPOUT1Q5T280 376 aaKnown RBP17.05■□□□□ 0.32
DDR1-278ENST00000515233 FAM228AQ86W67 206 aa17.05■□□□□ 0.32
DDR1-278ENST00000515233 CKAP2LQ8IYA6 745 aa17.05■□□□□ 0.32
DDR1-278ENST00000515233 MICAL1Q8TDZ2 1067 aa17.05■□□□□ 0.32
DDR1-278ENST00000515233 FBXL18Q96ME1 805 aa17.05■□□□□ 0.32
DDR1-278ENST00000515233 OSMRQ99650 979 aa17.05■□□□□ 0.32
DDR1-278ENST00000515233 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
DDR1-278ENST00000515233 TYW1Q9NV66 732 aaKnown RBP17.05■□□□□ 0.32
DDR1-278ENST00000515233 PCDHA10Q9Y5I2 948 aa17.05■□□□□ 0.32
DDR1-278ENST00000515233 MAGEB2O15479 319 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 PSAPP07602 524 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 CIITAP33076 1130 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.323e-6■■■■□ 25.7
DDR1-278ENST00000515233 ERVFC1P60507 584 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 DUSP6Q16828 381 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 COLGALT1Q8NBJ5 622 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 CCDC12Q8WUD4 166 aaPredicted RBP17.04■□□□□ 0.32
DDR1-278ENST00000515233 CWH43Q9H720 699 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 ATP6V0A4Q9HBG4 840 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 BARX2Q9UMQ3 279 aaPredicted RBP17.04■□□□□ 0.32
DDR1-278ENST00000515233 CEP131Q9UPN4 1083 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 LZTS1Q9Y250 596 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 PCDHGC5Q9Y5F6 944 aa17.04■□□□□ 0.32
DDR1-278ENST00000515233 FSCN2O14926 492 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 ADAMTS3O15072 1205 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
DDR1-278ENST00000515233 VTNP04004 478 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 IBSPP21815 317 aaPredicted RBP17.03■□□□□ 0.32
DDR1-278ENST00000515233 GNA11P29992 359 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 PLCB3Q01970 1234 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 NHLH1Q02575 133 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 PKN1Q16512 942 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 TMEM184AQ6ZMB5 413 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 THNSL1Q8IYQ7 743 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 REXO1Q8N1G1 1221 aaKnown RBP17.03■□□□□ 0.32
DDR1-278ENST00000515233 FBXL16Q8N461 479 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 METTL13Q8N6R0 699 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 LINC01465Q8N7H1 131 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 KCNB2Q92953 911 aa17.03■□□□□ 0.32
DDR1-278ENST00000515233 PHF7Q9BWX1 381 aaPredicted RBP17.03■□□□□ 0.32
DDR1-278ENST00000515233 USP15Q9Y4E8 981 aaPredicted RBP17.03■□□□□ 0.32
DDR1-278ENST00000515233 PER2O15055 1255 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 FGFR1P11362 822 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 ATF7P17544 494 aaPredicted RBP17.02■□□□□ 0.32
DDR1-278ENST00000515233 LAG3P18627 525 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 FGD1P98174 961 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 KCNC3Q14003 757 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 TRIM67Q6ZTA4 783 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 RASGRP4Q8TDF6 673 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 SUSD6Q92537 303 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 MRPS27Q92552 414 aaKnown RBP17.02■□□□□ 0.32
DDR1-278ENST00000515233 FAM167AQ96KS9 214 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 TMEM117Q9H0C3 514 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 GABBR1Q9UBS5 961 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 TCEAL9Q9UHQ7 104 aa17.02■□□□□ 0.32
DDR1-278ENST00000515233 PUF60Q9UHX1 559 aaKnown RBP17.02■□□□□ 0.32
DDR1-278ENST00000515233 WDFY4Q6ZS81 3184 aa17.02■□□□□ 0.31
DDR1-278ENST00000515233 NID2Q14112 1375 aa17.02■□□□□ 0.31
DDR1-278ENST00000515233 WDR81Q562E7 1941 aa17.02■□□□□ 0.31
DDR1-278ENST00000515233 ZNF318Q5VUA4 2279 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 TECTAO75443 2155 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 HOXA2O43364 376 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 TMOD1P28289 359 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 NLRP11P59045 1033 aaKnown RBP17.01■□□□□ 0.31
DDR1-278ENST00000515233 APOBRQ0VD83 1088 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 PRR16Q569H4 304 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 EFCAB12Q6NXP0 572 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 LRRC55Q6ZSA7 311 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 VN1R2Q8NFZ6 395 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 BICD2Q8TD16 824 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 LENG9Q96B70 501 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 CASD1Q96PB1 797 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 PPP1R16BQ96T49 567 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 ADAMTS10Q9H324 1103 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 NRBP2Q9NSY0 501 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 HCSTQ9UBK5 93 aa17.01■□□□□ 0.31
DDR1-278ENST00000515233 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
DDR1-278ENST00000515233 WDR64B1ANS9 1081 aa17■□□□□ 0.31
DDR1-278ENST00000515233 CDC45O75419 566 aa17■□□□□ 0.31
DDR1-278ENST00000515233 ZSCAN20P17040 1043 aaPredicted RBP17■□□□□ 0.31
DDR1-278ENST00000515233 EIF4BP23588 611 aaKnown RBP17■□□□□ 0.31
DDR1-278ENST00000515233 MRE11P49959 708 aa17■□□□□ 0.31
DDR1-278ENST00000515233 CLCN3P51790 818 aa17■□□□□ 0.31
DDR1-278ENST00000515233 ZXDAP98168 799 aa17■□□□□ 0.31
DDR1-278ENST00000515233 Q6ZUG5 572 aa17■□□□□ 0.31
DDR1-278ENST00000515233 TRMT1LQ7Z2T5 733 aaKnown RBP17■□□□□ 0.31
DDR1-278ENST00000515233 BRF1Q92994 677 aa17■□□□□ 0.31
DDR1-278ENST00000515233 AGXT2Q9BYV1 514 aa17■□□□□ 0.31
DDR1-278ENST00000515233 NGRNQ9NPE2 291 aaKnown RBP17■□□□□ 0.31
DDR1-278ENST00000515233 RNF19AQ9NV58 838 aa17■□□□□ 0.31
DDR1-278ENST00000515233 SAMM50Q9Y512 469 aa17■□□□□ 0.31
DDR1-278ENST00000515233 PIEZO1Q92508 2521 aa17■□□□□ 0.31
DDR1-278ENST00000515233 TMEM221A6NGB7 291 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 M0R296 226 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 EDIL3O43854 480 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 ZNF862O60290 1169 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 SRGAP2BP0DMP2 458 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 CPA1P15085 419 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms