RNA–Protein interactions for RNA: ENST00000515129.5

SEMA6A-215, Transcript of semaphorin 6A, human

TSL 2

Gene SEMA6A, Length 2,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA6A-215	ENST00000515129	CACNA2D4	Q7Z3S7	1137 aa		11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ATRIP	Q8WXE1	791 aa		11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	SOCS4	Q8WXH5	440 aa		11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	GJA10	Q969M2	543 aa		11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	DEF6	Q9H4E7	631 aa		11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ZNF446	Q9NWS9	450 aa		11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	FAM184B	Q9ULE4	1060 aa		11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	PRR12	Q9ULL5	1215 aa		11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ADAMTS5	Q9UNA0	930 aa		11.99	□□□□□ -0.49
SEMA6A-215	ENST00000515129	WDR46	O15213	610 aa	Known RBP	11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	MED24	O75448	989 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	KLK7	P49862	253 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	SLC12A3	P55017	1021 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	CACNB2	Q08289	660 aa	Predicted RBP	11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	MAP2K5	Q13163	448 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	EDRF1	Q3B7T1	1238 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ZCWPW2	Q504Y3	356 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	NPLOC4	Q8TAT6	608 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	DIS3L	Q8TF46	1054 aa	Known RBP	11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	PARD6B	Q9BYG5	372 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	SPATC1L	Q9H0A9	340 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ZHX3	Q9H4I2	956 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	FAM53C	Q9NYF3	392 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	PUF60	Q9UHX1	559 aa	Known RBP	11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	DNAH12	Q6ZR08	3092 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	FRMD3	A2A2Y4	597 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	CCDC151	A5D8V7	595 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	CETN3	O15182	167 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ERLIN1	O75477	346 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	IGHA2	P01877	340 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	TFRC	P02786	760 aa	Known RBP	11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	PRKAR2A	P13861	404 aa	Known RBP	11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	STAT3	P40763	770 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	RGS2	P41220	211 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	CCNA1	P78396	465 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	GRB14	Q14449	540 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	TMEM132B	Q14DG7	1078 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	WDR78	Q5VTH9	848 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	CATSPER3	Q86XQ3	398 aa		11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	SYT2	Q8N9I0	419 aa	Predicted RBP	11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
SEMA6A-215	ENST00000515129	RPTOR	Q8N122	1335 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ANO9	A1A5B4	782 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	SLC15A5	A6NIM6	579 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	POLR2M	P0CAP2	368 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	PNMA6A	P0CW24	399 aa	Predicted RBP	11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ERCC3	P19447	782 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	CCND3	P30281	292 aa	Predicted RBP	11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	VAV2	P52735	878 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	MARS	P56192	900 aa	Known RBP	11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	CKAP4	Q07065	602 aa	Known RBP	11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	SPIRE1	Q08AE8	756 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	POTEG	Q6S5H5	508 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	RRAGA	Q7L523	313 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	FAM160B2	Q86V87	743 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	REPS2	Q8NFH8	660 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	RPGRIP1	Q96KN7	1286 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	APBA2	Q99767	749 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	GBP3	Q9H0R5	595 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	ZSWIM4	Q9H7M6	989 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	LUC7L	Q9NQ29	371 aa	Known RBP	11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	MRPL11	Q9Y3B7	192 aa	Known RBP	11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	PCDHA2	Q9Y5H9	948 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	FHOD1	Q9Y613	1164 aa		11.97	□□□□□ -0.49
SEMA6A-215	ENST00000515129	FAM86B1	E9PN63	330 aa		11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	AKR1B10	O60218	316 aa		11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	PLA2G6	O60733	806 aa		11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	FARP2	O94887	1054 aa	Predicted RBP	11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	FAM86B2	P0C5J1	330 aa		11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	NELFCD	Q8IXH7	590 aa		11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	SYN2	Q92777	582 aa	Predicted RBP	11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	SECISBP2L	Q93073	1101 aa	Known RBP	11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	LENG9	Q96B70	501 aa		11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	IFIH1	Q9BYX4	1025 aa	Known RBP	11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	HMX1	Q9NP08	348 aa	Predicted RBP	11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	TBC1D7	Q9P0N9	293 aa		11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	SAR1B	Q9Y6B6	198 aa		11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	COL11A1	P12107	1806 aa	Predicted RBP	11.96	□□□□□ -0.49
SEMA6A-215	ENST00000515129	MSH4	O15457	936 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	TBCA	O75347	108 aa	Known RBP	11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	TACC1	O75410	805 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	ABL1	P00519	1130 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	HOXC6	P09630	235 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	HOXA13	P31271	388 aa	Predicted RBP	11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	AMPD2	Q01433	879 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	ADAM9	Q13443	819 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	PLS1	Q14651	629 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	LHX8	Q68G74	356 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	IQCE	Q6IPM2	695 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	TRAPPC11	Q7Z392	1133 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	GLIS3	Q8NEA6	775 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	TRIM58	Q8NG06	486 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	SCFD1	Q8WVM8	642 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	TBC1D5	Q92609	795 aa		11.96	□□□□□ -0.5
SEMA6A-215	ENST00000515129	CEP72	Q9P209	647 aa		11.96	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms