RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 AFF2P51816 1311 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 LRRC53A6NM62 1247 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 NCK2O43639 380 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 ARL6IP4Q66PJ3 421 aaKnown RBP14.22□□□□□ -0.13
TCOF1-214ENST00000515035 WDR24Q96S15 920 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 SLC26A7Q8TE54 656 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 PUS3Q9BZE2 481 aaKnown RBP14.22□□□□□ -0.13
TCOF1-214ENST00000515035 CEP72Q9P209 647 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 SUN2Q9UH99 717 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 PRPSAP2O60256 369 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 E2F6O75461 281 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 PLA2G4BP0C869 781 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 KITP10721 976 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 PTPREP23469 700 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 DAB2P98082 770 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 KIF19Q2TAC6 998 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 CLEC17AQ6ZS10 378 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 DTNBP1Q96EV8 351 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 CCDC17Q96LX7 622 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 ATG3Q9NT62 314 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 SUCLA2Q9P2R7 463 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-214ENST00000515035 CDC42BPGQ6DT37 1551 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 TARSL2A2RTX5 802 aaKnown RBP14.22□□□□□ -0.13
TCOF1-214ENST00000515035 PRPF3O43395 683 aaKnown RBP14.22□□□□□ -0.13
TCOF1-214ENST00000515035 CHEK2O96017 543 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 CAV1Q03135 178 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 GFPT1Q06210 699 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-214ENST00000515035 ERFEQ4G0M1 354 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 FMR1NBQ8N0W7 255 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-214ENST00000515035 CCDC90BQ9GZT6 254 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 GOLPH3LQ9H4A5 285 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 FBXL5Q9UKA1 691 aa14.22□□□□□ -0.13
TCOF1-214ENST00000515035 H3BRJ5 948 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 NOP14P78316 857 aaKnown RBP14.21□□□□□ -0.13
TCOF1-214ENST00000515035 RABGAP1LQ5R372 815 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 GPATCH4Q5T3I0 446 aaKnown RBP14.21□□□□□ -0.13
TCOF1-214ENST00000515035 MCF2L2Q86YR7 1114 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 TRIM59Q8IWR1 403 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 TTC25Q96NG3 672 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 NACC1Q96RE7 527 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 PAIP2BQ9ULR5 123 aaKnown RBP14.21□□□□□ -0.13
TCOF1-214ENST00000515035 LZTS1Q9Y250 596 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 TRIM49BA6NDI0 452 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 TJP3O95049 919 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 ARHGDIAP52565 204 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 BBS5Q8N3I7 341 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 GRAMD1AQ96CP6 724 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 DACH2Q96NX9 599 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 KMT5AQ9NQR1 393 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 TRAF3IP3Q9Y228 551 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 GRID2IPA4D2P6 1211 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 CUL3Q13618 768 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 ASPRV1Q53RT3 343 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 CLEC4GQ6UXB4 293 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 ACAD11Q709F0 780 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 PAGR1Q9BTK6 254 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 EPN3Q9H201 632 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 PARVGQ9HBI0 331 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 CYP4F11Q9HBI6 524 aa14.21□□□□□ -0.13
TCOF1-214ENST00000515035 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.14
TCOF1-214ENST00000515035 KDM1AO60341 852 aa14.21□□□□□ -0.14
TCOF1-214ENST00000515035 ZRANB2O95218 330 aaKnown RBP eCLIP14.21□□□□□ -0.14
TCOF1-214ENST00000515035 SPDYE6P0CI01 402 aa14.21□□□□□ -0.14
TCOF1-214ENST00000515035 KLC1Q07866 573 aa14.21□□□□□ -0.14
TCOF1-214ENST00000515035 MORF4L2Q15014 288 aa14.21□□□□□ -0.14
TCOF1-214ENST00000515035 KLHL38Q2WGJ6 581 aa14.21□□□□□ -0.14
TCOF1-214ENST00000515035 TAF1BQ53T94 588 aaPredicted RBP14.21□□□□□ -0.14
TCOF1-214ENST00000515035 KIAA2013Q8IYS2 634 aa14.21□□□□□ -0.14
TCOF1-214ENST00000515035 RYBPQ8N488 228 aaPredicted RBP14.21□□□□□ -0.14
TCOF1-214ENST00000515035 OSBP2Q969R2 916 aa14.21□□□□□ -0.14
TCOF1-214ENST00000515035 ZSWIM5Q9P217 1185 aa14.21□□□□□ -0.14
TCOF1-214ENST00000515035 PI4K2BG5E9Z4 385 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 STXBP3O00186 592 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 RPS6KA4O75676 772 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 NPR1P16066 1061 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 MDH1P40925 334 aaKnown RBP14.2□□□□□ -0.14
TCOF1-214ENST00000515035 LIFRP42702 1097 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 PSMC1P62191 440 aaKnown RBP14.2□□□□□ -0.14
TCOF1-214ENST00000515035 KLC3Q6P597 504 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 ZNF473Q8WTR7 871 aaKnown RBP14.2□□□□□ -0.14
TCOF1-214ENST00000515035 FAF2Q96CS3 445 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 CCT8L2Q96SF2 557 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 ZNF577Q9BSK1 485 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 HEMGNQ9BXL5 484 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 NRBP2Q9NSY0 501 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 DDX28Q9NUL7 540 aaKnown RBP14.2□□□□□ -0.14
TCOF1-214ENST00000515035 EHD2Q9NZN4 543 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 STX18Q9P2W9 335 aaKnown RBP14.2□□□□□ -0.14
TCOF1-214ENST00000515035 INPP5FQ9Y2H2 1132 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 TLR3O15455 904 aaKnown RBP14.2□□□□□ -0.14
TCOF1-214ENST00000515035 CASP1P29466 404 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 RFX8Q6ZV50 586 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 GFM2Q969S9 779 aaKnown RBP14.2□□□□□ -0.14
TCOF1-214ENST00000515035 ANKRD36BP1Q96IX9 119 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 WDR11Q9BZH6 1224 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 MRPL40Q9NQ50 206 aaKnown RBP14.2□□□□□ -0.14
TCOF1-214ENST00000515035 ANAPC7Q9UJX3 599 aa14.2□□□□□ -0.14
TCOF1-214ENST00000515035 EIF3HO15372 352 aaKnown RBP eCLIP14.2□□□□□ -0.145e-6■■■□□ 14.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms