RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 CASD1Q96PB1 797 aa13.69□□□□□ -0.22
SMAD5-210ENST00000515005 SFXN1Q9H9B4 322 aa13.69□□□□□ -0.22
SMAD5-210ENST00000515005 JMJD4Q9H9V9 463 aa13.69□□□□□ -0.22
SMAD5-210ENST00000515005 C1QTNF9BB2RNN3 333 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 DHX16O60231 1041 aaKnown RBP13.68□□□□□ -0.22
SMAD5-210ENST00000515005 SMARCA5O60264 1052 aaPredicted RBP13.68□□□□□ -0.22
SMAD5-210ENST00000515005 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 ZIC2O95409 532 aaPredicted RBP13.68□□□□□ -0.22
SMAD5-210ENST00000515005 RPLP2P05387 115 aaKnown RBP13.68□□□□□ -0.22
SMAD5-210ENST00000515005 C1QTNF9P0C862 333 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 GBP2P32456 591 aaPredicted RBP13.68□□□□□ -0.22
SMAD5-210ENST00000515005 PTPN14Q15678 1187 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 LPAL2Q16609 132 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 FCHSD1Q86WN1 690 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 NELL1Q92832 810 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 INPP4AQ96PE3 977 aaPredicted RBP13.68□□□□□ -0.22
SMAD5-210ENST00000515005 TMEM117Q9H0C3 514 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 RNF19AQ9NV58 838 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 TMEM161AQ9NX61 479 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 ERAP1Q9NZ08 941 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
SMAD5-210ENST00000515005 NOC2LQ9Y3T9 749 aaKnown RBP13.68□□□□□ -0.22
SMAD5-210ENST00000515005 KDM3AQ9Y4C1 1321 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 MAST4O15021 2626 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 GDF9O60383 454 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 HMMRO75330 724 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 INSRRP14616 1297 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 STARD6P59095 220 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 FAM189BP81408 668 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 KRT76Q01546 638 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 TSSK4Q6SA08 328 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 VPS52Q8N1B4 723 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 AMNQ9BXJ7 453 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 BCO2Q9BYV7 579 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 CDHR5Q9HBB8 845 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 MAP3K20Q9NYL2 800 aaKnown RBP13.67□□□□□ -0.22
SMAD5-210ENST00000515005 GINS2Q9Y248 185 aa13.67□□□□□ -0.22
SMAD5-210ENST00000515005 MTF2Q9Y483 593 aaPredicted RBP13.67□□□□□ -0.22
SMAD5-210ENST00000515005 ASH1LQ9NR48 2969 aaKnown RBP13.67□□□□□ -0.22
SMAD5-210ENST00000515005 GSTTP1A0A1W2PQM5 241 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 NT5C1B-RDH14C9J2C7 533 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 FIBPO43427 364 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 PPP1R11O60927 126 aaPredicted RBP13.66□□□□□ -0.22
SMAD5-210ENST00000515005 RPS6KA5O75582 802 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMAD5-210ENST00000515005 BMS1Q14692 1282 aaKnown RBP13.66□□□□□ -0.22
SMAD5-210ENST00000515005 ZMYM1Q5SVZ6 1142 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 LRSAM1Q6UWE0 723 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 LRRC43Q8N309 656 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 ST13P5Q8NFI4 369 aaPredicted RBP13.66□□□□□ -0.22
SMAD5-210ENST00000515005 TRAPPC12Q8WVT3 735 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 TMEM40Q8WWA1 233 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 MYADMQ96S97 322 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 ZBP1Q9H171 429 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 EPS15L1Q9UBC2 864 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 ST3GAL5Q9UNP4 418 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 PCDHA2Q9Y5H9 948 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 LAMA4Q16363 1823 aa13.66□□□□□ -0.22
SMAD5-210ENST00000515005 RRN3P2A6NIE6 340 aa13.65□□□□□ -0.22
SMAD5-210ENST00000515005 DDX1Q92499 740 aaKnown RBP13.65□□□□□ -0.22
SMAD5-210ENST00000515005 SENP7Q9BQF6 1050 aa13.65□□□□□ -0.22
SMAD5-210ENST00000515005 ZKSCAN3Q9BRR0 538 aa13.65□□□□□ -0.22
SMAD5-210ENST00000515005 ELAC1Q9H777 363 aaKnown RBP13.65□□□□□ -0.22
SMAD5-210ENST00000515005 SLC2A4RGQ9NR83 387 aa13.65□□□□□ -0.22
SMAD5-210ENST00000515005 IRAK3Q9Y616 596 aa13.65□□□□□ -0.22
SMAD5-210ENST00000515005 DSPP15924 2871 aaKnown RBP13.65□□□□□ -0.22
SMAD5-210ENST00000515005 KANSL1LA0AUZ9 987 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
SMAD5-210ENST00000515005 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 CTSAP10619 480 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 SNW1Q13573 536 aaKnown RBP13.64□□□□□ -0.23
SMAD5-210ENST00000515005 WTAPQ15007 396 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 UNQ6494/PRO21346Q6UXR6 183 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 C15orf39Q6ZRI6 1047 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 PRR23CQ6ZRP0 262 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 TMEM173Q86WV6 379 aaPredicted RBP13.64□□□□□ -0.23
SMAD5-210ENST00000515005 KDF1Q8NAX2 398 aaPredicted RBP13.64□□□□□ -0.23
SMAD5-210ENST00000515005 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 PANK1Q8TE04 598 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 NXPE3Q969Y0 559 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 SHDQ96IW2 340 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 SMARCAD1Q9H4L7 1026 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 SEMA4GQ9NTN9 838 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 EVPLQ92817 2033 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 MYH15Q9Y2K3 1946 aa13.64□□□□□ -0.23
SMAD5-210ENST00000515005 NBEAQ8NFP9 2946 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 ATP9AO75110 1047 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 STAM2O75886 525 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 BCAR1P56945 870 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 RING1Q06587 406 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 UBXN2BQ14CS0 331 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 ASPRV1Q53RT3 343 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 PPFIBP1Q86W92 1011 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 ABI1Q8IZP0 508 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 NME8Q8N427 588 aa13.63□□□□□ -0.23
SMAD5-210ENST00000515005 SAMD3Q8N6K7 520 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms