RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 GBP3Q9H0R5 595 aa8.98□□□□□ -0.97
CPNE4-211ENST00000514439 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
CPNE4-211ENST00000514439 SIX2Q9NPC8 291 aa8.98□□□□□ -0.97
CPNE4-211ENST00000514439 LUC7LQ9NQ29 371 aaKnown RBP8.98□□□□□ -0.97
CPNE4-211ENST00000514439 AGPAT3Q9NRZ7 376 aa8.98□□□□□ -0.97
CPNE4-211ENST00000514439 ADAMTS1Q9UHI8 967 aa8.98□□□□□ -0.97
CPNE4-211ENST00000514439 CNOT7Q9UIV1 285 aaKnown RBP8.98□□□□□ -0.97
CPNE4-211ENST00000514439 BCS1LQ9Y276 419 aa8.98□□□□□ -0.97
CPNE4-211ENST00000514439 CTDP1Q9Y5B0 961 aaPredicted RBP8.98□□□□□ -0.97
CPNE4-211ENST00000514439 GJA3Q9Y6H8 435 aa8.98□□□□□ -0.97
CPNE4-211ENST00000514439 ZHX2Q9Y6X8 837 aa8.98□□□□□ -0.97
CPNE4-211ENST00000514439 BRCA1P38398 1863 aaKnown RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 GTPBP10A4D1E9 387 aaKnown RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 PPP1R12BO60237 982 aaPredicted RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 PPP1R37O75864 691 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 CYP2J2P51589 502 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 SPP2Q13103 211 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 NFRKBQ6P4R8 1299 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 IRF2BP2Q7Z5L9 587 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 CREG2Q8IUH2 290 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 RNF10Q8N5U6 811 aaKnown RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 RBM46Q8TBY0 533 aaKnown RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 COG1Q8WTW3 980 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 ATG4CQ96DT6 458 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 WNK4Q96J92 1243 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 TRERF1Q96PN7 1200 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 STRA6Q9BX79 667 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 MAP3K20Q9NYL2 800 aaKnown RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 FBXL5Q9UKA1 691 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 AJAP1Q9UKB5 411 aaPredicted RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 HYOU1Q9Y4L1 999 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 SAMM50Q9Y512 469 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 K7ENM7 598 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 FZD9O00144 591 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 VWA5AO00534 786 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 NCK2O43639 380 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 ZBED4O75132 1171 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 TUBBP07437 444 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 MYCLP12524 364 aaPredicted RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 PRLRP16471 622 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 PTK2Q05397 1052 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 DMTNQ08495 405 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 WDR93Q6P2C0 686 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 NSMFQ6X4W1 530 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 MAEAQ7L5Y9 396 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 ZNF571Q7Z3V5 609 aaPredicted RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 SAMD3Q8N6K7 520 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 OSBPL9Q96SU4 736 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 PACSIN1Q9BY11 444 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 UBXN6Q9BZV1 441 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 MTFR1LQ9H019 292 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 TBC1D22BQ9NU19 505 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 DMAC2Q9NW81 257 aa8.97□□□□□ -0.97
CPNE4-211ENST00000514439 DBR1Q9UK59 544 aaKnown RBP8.97□□□□□ -0.97
CPNE4-211ENST00000514439 MAP2K7O14733 419 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 TCP1P17987 556 aaKnown RBP8.96□□□□□ -0.97
CPNE4-211ENST00000514439 KLRC1P26715 233 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 QARSP47897 775 aaKnown RBP8.96□□□□□ -0.97
CPNE4-211ENST00000514439 RARRES1P49788 294 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 NAP1L1P55209 391 aaKnown RBP8.96□□□□□ -0.97
CPNE4-211ENST00000514439 BACE1P56817 501 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 JAM2P57087 298 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 PLS1Q14651 629 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 NAB2Q15742 525 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 KIAA0753Q2KHM9 967 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 DCAF15Q66K64 600 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 IQCEQ6IPM2 695 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 GJB7Q6PEY0 223 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 RNF207Q6ZRF8 634 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 ZNF572Q7Z3I7 529 aaPredicted RBP8.96□□□□□ -0.97
CPNE4-211ENST00000514439 SCYL3Q8IZE3 742 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 WRNIP1Q96S55 665 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 RMDN3Q96TC7 470 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 PSMB7Q99436 277 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 PDCD2LQ9BRP1 358 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 TLR10Q9BXR5 811 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 SUGCTQ9HAC7 445 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 PXMP2Q9NR77 195 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 L1RE1Q9UN81 338 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 FRMD4BQ9Y2L6 1034 aa8.96□□□□□ -0.97
CPNE4-211ENST00000514439 LTBP3Q9NS15 1303 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 LYPLA2O95372 231 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 TRIM49P0CI25 452 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 TRIM49CP0CI26 452 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 CXCR5P32302 372 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 PRKCIP41743 596 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 FMO5P49326 533 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 C2orf54Q08AI8 447 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 UGCGQ16739 394 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 PRAMEF18Q5VWM3 479 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 SYCP3Q8IZU3 236 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 GOLGA5Q8TBA6 731 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 ZKSCAN4Q969J2 545 aaPredicted RBP8.96□□□□□ -0.98
CPNE4-211ENST00000514439 RNF146Q9NTX7 359 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 LARSQ9P2J5 1176 aaKnown RBP8.96□□□□□ -0.98
CPNE4-211ENST00000514439 PNMA2Q9UL42 364 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 FZD1Q9UP38 647 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 RIPK3Q9Y572 518 aa8.96□□□□□ -0.98
CPNE4-211ENST00000514439 BZW2Q9Y6E2 419 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms