RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 CDC6Q99741 560 aa5.48□□□□□ -1.53
ATP2C1-220ENST00000513636 OR10A5Q9H207 317 aa5.48□□□□□ -1.53
ATP2C1-220ENST00000513636 NRDE2Q9H7Z3 1164 aa5.48□□□□□ -1.53
ATP2C1-220ENST00000513636 ABCA5Q8WWZ7 1642 aa5.48□□□□□ -1.53
ATP2C1-220ENST00000513636 EIF4G3O43432 1585 aaKnown RBP5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 PMS2P1A4D2B8 440 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 FOXN1O15353 648 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 MC4RP32245 332 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 PTGS2P35354 604 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 RIN1Q13671 783 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 ANKS3Q6ZW76 656 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 C16orf59Q7L2K0 433 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 MAMDC2Q7Z304 686 aaPredicted RBP5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 CELF2-AS1Q8N7Q2 184 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 ST13P5Q8NFI4 369 aaPredicted RBP5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 CALML6Q8TD86 181 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 PCDHA8Q9Y5H6 950 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 ASXL2Q76L83 1435 aa5.47□□□□□ -1.53
ATP2C1-220ENST00000513636 CLASP2O75122 1294 aaKnown RBP5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 RHOBTB3O94955 611 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 DNM2P50570 870 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 JAM2P57087 298 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 SPTY2D1Q68D10 685 aaPredicted RBP5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 TMEM200BQ69YZ2 307 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 HAS1Q92839 578 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 PTPRN2Q92932 1015 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 LPPQ93052 612 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 MIEF2Q96C03 454 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 SH3BP1Q9Y3L3 701 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 TNFRSF18Q9Y5U5 241 aa5.46□□□□□ -1.54
ATP2C1-220ENST00000513636 IFT140Q96RY7 1462 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 ABCA10Q8WWZ4 1543 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 H2AFYO75367 372 aaKnown RBP5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 NUDT3O95989 172 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 C4BPAP04003 597 aaKnown RBP5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 AMY2AP04746 511 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 AMY2BP19961 511 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 MAN2A2P49641 1150 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 SESN2P58004 480 aaPredicted RBP5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 HGFACQ04756 655 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 YOD1Q5VVQ6 348 aaPredicted RBP5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 LRSAM1Q6UWE0 723 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 ZC3H7AQ8IWR0 971 aaKnown RBP5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 SCUBE1Q8IWY4 988 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 SYNE4Q8N205 404 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 RABGGTAQ92696 567 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 AMNQ9BXJ7 453 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 BTBD7Q9P203 1132 aa5.45□□□□□ -1.54
ATP2C1-220ENST00000513636 PRAMEF22A3QJZ6 481 aa5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 SCDO00767 359 aa5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 KCNK3O14649 394 aa5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 WNT9AO14904 365 aa5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 MMEP08473 750 aa5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 ZC3H6P61129 1189 aaKnown RBP5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 ATP2C1P98194 919 aaPredicted RBP5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 ADAM15Q13444 863 aa5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 PCDH19Q8TAB3 1148 aa5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 GCDHQ92947 438 aaPredicted RBP5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 AGO3Q9H9G7 860 aaKnown RBP5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 VWA7Q9Y334 891 aa5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 RAD54L2Q9Y4B4 1467 aa5.44□□□□□ -1.54
ATP2C1-220ENST00000513636 CUL7Q14999 1698 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 CCDC66A2RUB6 948 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 GCP02774 474 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 APEX1P27695 318 aaKnown RBP5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 KANK2Q63ZY3 851 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 KLHDC10Q6PID8 442 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 RPUSD2Q8IZ73 545 aaKnown RBP5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 VOPP1Q96AW1 172 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 GBP4Q96PP9 640 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 GPR87Q9BY21 358 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 TRIM55Q9BYV6 548 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 KIAA1522Q9P206 1035 aaPredicted RBP5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 CBLCQ9ULV8 474 aa5.43□□□□□ -1.54
ATP2C1-220ENST00000513636 FOXP2O15409 715 aa5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 FGRP09769 529 aa5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 SCNN1GP51170 649 aa5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 SUMO1P63165 101 aaKnown RBP5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 MRPS21P82921 87 aaKnown RBP5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 SMAD3P84022 425 aaKnown RBP5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 ELAVL1Q15717 326 aaKnown RBP5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 GFM2Q969S9 779 aaKnown RBP5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 RPL10LQ96L21 214 aaKnown RBP5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 SPATA9Q9BWV2 254 aa5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 SLC6A15Q9H2J7 730 aa5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 RIOX1Q9H6W3 641 aa5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 SAE1Q9UBE0 346 aaPredicted RBP5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 HECAQ9UBI9 543 aaPredicted RBP5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 ZNHIT2Q9UHR6 403 aa5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 ASB1Q9Y576 335 aa5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 ADAMTS12P58397 1594 aa5.42□□□□□ -1.54
ATP2C1-220ENST00000513636 SOGA1O94964 1423 aa5.41□□□□□ -1.54
ATP2C1-220ENST00000513636 CHD1O14646 1710 aa5.41□□□□□ -1.54
ATP2C1-220ENST00000513636 TRBV23-1A0A0A0MS06 115 aa5.41□□□□□ -1.54
ATP2C1-220ENST00000513636 ZNF561-AS1K7EIQ3 104 aa5.41□□□□□ -1.54
ATP2C1-220ENST00000513636 TRAF5O00463 557 aa5.41□□□□□ -1.54
ATP2C1-220ENST00000513636 FAM20BO75063 409 aa5.41□□□□□ -1.54
ATP2C1-220ENST00000513636 MPIG6BO95866 241 aa5.41□□□□□ -1.54
ATP2C1-220ENST00000513636 KRT4P19013 534 aa5.41□□□□□ -1.54
ATP2C1-220ENST00000513636 STAT3P40763 770 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms