RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 KIF20BQ96Q89 1820 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 CACNA1SQ13698 1873 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 PATE3B3GLJ2 98 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 F6X3S4 739 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 H0Y8X5 98 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 TRAF5O00463 557 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 NPHP1O15259 732 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 GPR42O15529 346 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 B4GALT3O60512 393 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 C8BP07358 591 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 ACRP10323 421 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 TGM1P22735 817 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 CANXP27824 592 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 FXR1P51114 621 aaKnown RBP eCLIP4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 EPHB4P54760 987 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 CCDC27Q2M243 656 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 RGMBQ6NW40 437 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 CIR1Q86X95 450 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 LZTR1Q8N653 840 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 AMER2Q8N7J2 671 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 DDX11Q96FC9 970 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 SIN3AQ96ST3 1273 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 RNF186Q9NXI6 227 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 PARP2Q9UGN5 583 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 ING1Q9UK53 422 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 FHOD1Q9Y613 1164 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 SCN11AQ9UI33 1791 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 CDHR2Q9BYE9 1310 aa4.95□□□□□ -1.62
PDLIM5-218ENST00000513341 NPEPPSL1A6NEC2 478 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 HUNKP57058 714 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 KIF23Q02241 960 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 PSMD2Q13200 908 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 RCSD1Q6JBY9 416 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 PKN3Q6P5Z2 889 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 FBXL19Q6PCT2 694 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 TMC4Q7Z404 712 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 C2orf69Q8N8R5 385 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 MTA3Q9BTC8 594 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 BCAS3Q9H6U6 928 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 GPRC5DQ9NZD1 345 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 TCAF1Q9Y4C2 921 aa4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 SUPT16HQ9Y5B9 1047 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 COL11A2P13942 1736 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-218ENST00000513341 TLR3O15455 904 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 EEF1DP3Q658K8 133 aa4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 MCTP2Q6DN12 878 aa4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 FBXO46Q6PJ61 603 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 NBPF5PQ86XG9 351 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 MIB1Q86YT6 1006 aa4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 PCSK5Q92824 1860 aa4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 WWC2-AS2Q96NR7 200 aa4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 DEF6Q9H4E7 631 aa4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 HDAC9Q9UKV0 1011 aa4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 ZNRF3Q9ULT6 936 aa4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 ZNF652Q9Y2D9 606 aa4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 SF3B6Q9Y3B4 125 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-218ENST00000513341 MINDY4BA8MYZ0 360 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 MUSKO15146 869 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 RNMTO43148 476 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 CAMTA2O94983 1202 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 PMS1P54277 932 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 ZNF445P59923 1031 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 SLC39A6Q13433 755 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 FHL2Q14192 279 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 TNIP1Q15025 636 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 CRY2Q49AN0 593 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 WWC2Q6AWC2 1192 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 ERMP1Q7Z2K6 904 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 TTC5Q8N0Z6 440 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 SLC17A8Q8NDX2 589 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 MBD6Q96DN6 1003 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 SLC9A7Q96T83 725 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 GLIS2Q9BZE0 524 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 TMX4Q9H1E5 349 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 GBA2Q9HCG7 927 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 GP6Q9HCN6 339 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 KIF7Q2M1P5 1343 aa4.92□□□□□ -1.62
PDLIM5-218ENST00000513341 BCORQ6W2J9 1755 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 SNED1Q8TER0 1413 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 H7C1D1 291 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 PPP2CBP62714 309 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 PPP2CAP67775 309 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 FKBP1BP68106 108 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 CXCL9Q07325 125 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 MIIPQ5JXC2 388 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 SULT6B1Q6IMI4 303 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 ZNF790Q6PG37 636 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 ETV3LQ6ZN32 361 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 NIM1KQ8IY84 436 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 CCDC144CPQ8IYA2 1237 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 TAB3Q8N5C8 712 aaPredicted RBP4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 SUPT20HQ8NEM7 779 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 DPF2Q92785 391 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 CRAMP1Q96RY5 1269 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 RXFP1Q9HBX9 757 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 FBLN5Q9UBX5 448 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 HEG1Q9ULI3 1381 aa4.91□□□□□ -1.62
PDLIM5-218ENST00000513341 CUL9Q8IWT3 2517 aa4.9□□□□□ -1.62
PDLIM5-218ENST00000513341 MRC1P22897 1456 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms