RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 ESRP1Q6NXG1 681 aaKnown RBP7.47□□□□□ -1.21
CHD1-209ENST00000512844 ESPNLQ6ZVH7 1005 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 HDGFL2Q7Z4V5 671 aaPredicted RBP7.47□□□□□ -1.21
CHD1-209ENST00000512844 KBTBD2Q8IY47 623 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 RTF1Q92541 710 aaKnown RBP7.47□□□□□ -1.21
CHD1-209ENST00000512844 SLC5A5Q92911 643 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 FOXRED1Q96CU9 486 aaPredicted RBP7.47□□□□□ -1.21
CHD1-209ENST00000512844 EMC7Q9NPA0 242 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 JADE2Q9NQC1 790 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 ADAM29Q9UKF5 820 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 NOC2LQ9Y3T9 749 aaKnown RBP7.47□□□□□ -1.21
CHD1-209ENST00000512844 ZNF536O15090 1300 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 SBNO2Q9Y2G9 1366 aa7.46□□□□□ -1.21
CHD1-209ENST00000512844 VIL1P09327 827 aaKnown RBP7.46□□□□□ -1.22
CHD1-209ENST00000512844 CNR2P34972 360 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 ETV4P43268 484 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 RGS3P49796 1198 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 ADCY2Q08462 1091 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 ZMAT1Q5H9K5 638 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 GPR158Q5T848 1215 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 ZNF610Q8N9Z0 462 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 AJUBAQ96IF1 538 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 TEPSINQ96N21 525 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 XYLT2Q9H1B5 865 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 SAE1Q9UBE0 346 aaPredicted RBP7.46□□□□□ -1.22
CHD1-209ENST00000512844 MSRAQ9UJ68 235 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 CDC42EP3Q9UKI2 254 aa7.46□□□□□ -1.22
CHD1-209ENST00000512844 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.45□□□□□ -1.22
CHD1-209ENST00000512844 BPIP17213 487 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 RRADP55042 308 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 SESN3P58005 492 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 PHC1P78364 1004 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 SMAD3P84022 425 aaKnown RBP7.45□□□□□ -1.22
CHD1-209ENST00000512844 TOP3AQ13472 1001 aaPredicted RBP7.45□□□□□ -1.22
CHD1-209ENST00000512844 DGKDQ16760 1214 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 KANK2Q63ZY3 851 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 IQSEC1Q6DN90 963 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 ARHGEF18Q6ZSZ5 1173 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 FRMD7Q6ZUT3 714 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 GPR155Q7Z3F1 870 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 ZDHHC5Q9C0B5 715 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 POFUT1Q9H488 388 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 ZMAT4Q9H898 229 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 FAM184BQ9ULE4 1060 aa7.45□□□□□ -1.22
CHD1-209ENST00000512844 ARID1BQ8NFD5 2236 aaPredicted RBP7.44□□□□□ -1.22
CHD1-209ENST00000512844 NEMP1O14524 444 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 B4GALT4O60513 344 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 PRPF6O94906 941 aaKnown RBP7.44□□□□□ -1.22
CHD1-209ENST00000512844 HOXA5P20719 270 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 CTSWP56202 376 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 SESN2P58004 480 aaPredicted RBP7.44□□□□□ -1.22
CHD1-209ENST00000512844 NFIXQ14938 502 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 BROXQ5VW32 411 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 TTLL10Q6ZVT0 673 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 MYL10Q9BUA6 226 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 KATNBL1Q9H079 304 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 ADAM7Q9H2U9 754 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 KCMF1Q9P0J7 381 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 RAPGEFL1Q9UHV5 662 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 INVSQ9Y283 1065 aa7.44□□□□□ -1.22
CHD1-209ENST00000512844 TGM5O43548 720 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 KDM1AO60341 852 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 MAFO75444 373 aaPredicted RBP7.43□□□□□ -1.22
CHD1-209ENST00000512844 CSF2RBP32927 897 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 TMPRSS15P98073 1019 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 FAPQ12884 760 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 NOLC1Q14978 699 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHD1-209ENST00000512844 TERF2Q15554 542 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 TMEM200BQ69YZ2 307 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 KIAA1841Q6NSI8 718 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 FERMT3Q86UX7 667 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 AFAP1L2Q8N4X5 818 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 ZCRB1Q8TBF4 217 aaKnown RBP7.43□□□□□ -1.22
CHD1-209ENST00000512844 WDR66Q8TBY9 1149 aa7.43□□□□□ -1.22
CHD1-209ENST00000512844 ADAMTS20P59510 1910 aa7.42□□□□□ -1.22
CHD1-209ENST00000512844 H2AFYO75367 372 aaKnown RBP7.42□□□□□ -1.22
CHD1-209ENST00000512844 IBSPP21815 317 aaPredicted RBP7.42□□□□□ -1.22
CHD1-209ENST00000512844 STAT4Q14765 748 aa7.42□□□□□ -1.22
CHD1-209ENST00000512844 EIF4HQ15056 248 aaKnown RBP7.42□□□□□ -1.22
CHD1-209ENST00000512844 STRA8Q7Z7C7 330 aa7.42□□□□□ -1.22
CHD1-209ENST00000512844 OR5AN1Q8NGI8 311 aa7.42□□□□□ -1.22
CHD1-209ENST00000512844 RTEL1Q9NZ71 1219 aa7.42□□□□□ -1.22
CHD1-209ENST00000512844 LAMTOR5O43504 91 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 B4GALT3O60512 393 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 XPAP23025 273 aaPredicted RBP7.41□□□□□ -1.22
CHD1-209ENST00000512844 ID4P47928 161 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 STAT5BP51692 787 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 MYBPC3Q14896 1274 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 ZFYVE27Q5T4F4 411 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 RASSF3Q86WH2 238 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 GFM2Q969S9 779 aaKnown RBP7.41□□□□□ -1.22
CHD1-209ENST00000512844 MBD6Q96DN6 1003 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 DYDC2Q96IM9 177 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 HIST1H2AHQ96KK5 128 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 HIST1H2AJQ99878 128 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 VWA7Q9Y334 891 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 SHROOM4Q9ULL8 1493 aa7.41□□□□□ -1.22
CHD1-209ENST00000512844 ANKRD62A6NC57 917 aa7.4□□□□□ -1.22
CHD1-209ENST00000512844 ZNF888P0CJ79 500 aaPredicted RBP7.4□□□□□ -1.22
CHD1-209ENST00000512844 PPP2CBP62714 309 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms