RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CCDC183Q5T5S1 534 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 ASTLQ6HA08 431 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 SERINC5Q86VE9 423 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 ELOA2Q8IYF1 753 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 BLIDQ8IZY5 108 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 CCDC82Q8N4S0 544 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 SPPL3Q8TCT6 385 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 CLP1Q92989 425 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 ATP6V0A1Q93050 837 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 MFSD1Q9H3U5 465 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 JMJD4Q9H9V9 463 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 NOL7Q9UMY1 257 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 KCNJ14Q9UNX9 436 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 CACNA1HO95180 2353 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 GOLGA6L4A6NEF3 574 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 TREHO43280 583 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 F2P00734 622 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 ARP10275 920 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 ATF7P17544 494 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 CMA1P23946 247 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 PUM1Q14671 1186 aaKnown RBP eCLIP11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 STK38Q15208 465 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 AXDND1Q5T1B0 1012 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 KLHL23Q8NBE8 558 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 MICAL1Q8TDZ2 1067 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 POF1BQ8WVV4 589 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 SUSD6Q92537 303 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 TLE6Q9H808 572 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 C6orf50Q9HD87 102 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 TMEM63CQ9P1W3 806 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 TFIP11Q9UBB9 837 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 PNMA2Q9UL42 364 aa11.82□□□□□ -0.52
PDLIM5-217ENST00000512274 C17orf102A2RUQ5 167 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 LAD1O00515 517 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 CUTAO60888 179 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 NLRP5P59047 1200 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 NR5A1Q13285 461 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 SF3A1Q15459 793 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 ZSCAN23Q3MJ62 389 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 ARL6IP4Q66PJ3 421 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 CAVIN1Q6NZI2 390 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 KRT25Q7Z3Z0 450 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 ADGRF4Q8IZF3 695 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 ENGASEQ8NFI3 743 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 VN1R2Q8NFZ6 395 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 TBC1D5Q92609 795 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 HINFPQ9BQA5 517 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 PLVAPQ9BX97 442 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 UBA5Q9GZZ9 404 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 MAF1Q9H063 256 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 DDX41Q9UJV9 622 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 PCDHA7Q9UN72 937 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 CLIC4Q9Y696 253 aa11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 MRPL42Q9Y6G3 142 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-217ENST00000512274 FAM160A1Q05DH4 1040 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 MTMR3Q13615 1198 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 USH1GQ495M9 461 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 PAN2Q504Q3 1202 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 FLCNQ8NFG4 579 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 PIBF1Q8WXW3 757 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 APBB2Q92870 758 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 P2RX5Q93086 422 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 ZNF689Q96CS4 500 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 TIGD1Q96MW7 591 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 PIGSQ96S52 555 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 RC3H2Q9HBD1 1191 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 RIC8AQ9NPQ8 531 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 CDH22Q9UJ99 828 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 RALYQ9UKM9 306 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 SORCS3Q9UPU3 1222 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 HPSEQ9Y251 543 aa11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 SRPRBQ9Y5M8 271 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-217ENST00000512274 BAZ2BQ9UIF8 2168 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 RIF1Q5UIP0 2472 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 PI15O43692 258 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 ASGR2P07307 311 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 PRPHP41219 470 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 ME1P48163 572 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 FOSBP53539 338 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 NAPAP54920 295 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 ATP2C1P98194 919 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 SNW1Q13573 536 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 ANGPT1Q15389 498 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 STXBP2Q15833 593 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 LRSAM1Q6UWE0 723 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 HEATR3Q7Z4Q2 680 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 UBALD2Q8IYN6 164 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 SAMD3Q8N6K7 520 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 KRI1Q8N9T8 703 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 PPTC7Q8NI37 304 aa11.79□□□□□ -0.52
PDLIM5-217ENST00000512274 RNPEPQ9H4A4 650 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms