RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 NGRNQ9NPE2 291 aaKnown RBP21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 LIMD1Q9UGP4 676 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 SEC63Q9UGP8 760 aaKnown RBP21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 NFASCO94856 1347 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 EPG5Q9HCE0 2579 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 MAFGO15525 162 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 PI15O43692 258 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 CLASP2O75122 1294 aaKnown RBP21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 ATP4AP20648 1035 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 SMARCA1P28370 1054 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 TMC7Q7Z402 723 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 NCOA7Q8NI08 942 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 CASP10Q92851 521 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 PGBD1Q96JS3 809 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 MAP3K14Q99558 947 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 TMEM117Q9H0C3 514 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 U3KPZ7 1027 aaPredicted RBP21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 CACNA1BQ00975 2339 aa21.73■■□□□ 1.07
HMGCS1-206ENST00000511774 GPR32O75388 356 aa21.72■■□□□ 1.07
HMGCS1-206ENST00000511774 RALYLQ86SE5 291 aaKnown RBP21.72■■□□□ 1.07
HMGCS1-206ENST00000511774 RAB11FIP4Q86YS3 637 aa21.72■■□□□ 1.07
HMGCS1-206ENST00000511774 CCDC60Q8IWA6 550 aaPredicted RBP21.72■■□□□ 1.07
HMGCS1-206ENST00000511774 MRPL43Q8N983 215 aaKnown RBP21.72■■□□□ 1.07
HMGCS1-206ENST00000511774 CTCFLQ8NI51 663 aaPredicted RBP21.72■■□□□ 1.07
HMGCS1-206ENST00000511774 ELAC1Q9H777 363 aaKnown RBP21.72■■□□□ 1.07
HMGCS1-206ENST00000511774 PUF60Q9UHX1 559 aaKnown RBP21.72■■□□□ 1.07
HMGCS1-206ENST00000511774 OTOGLQ3ZCN5 2332 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 MYH9P35579 1960 aaKnown RBP21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 SPDYE3A6NKU9 549 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 GPR182O15218 404 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 DDAH1O94760 285 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 VTNP04004 478 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 GSPT1P15170 499 aaKnown RBP21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 NPR3P17342 541 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 ITIH3Q06033 890 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 SART3Q15020 963 aaKnown RBP21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 TPRNQ4KMQ1 711 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 CLLU1OSQ5K130 101 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 RARS2Q5T160 578 aaKnown RBP21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 ABHD15Q6UXT9 468 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 ZNF558Q96NG5 402 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 NECTIN4Q96NY8 510 aa21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 AGO4Q9HCK5 861 aaKnown RBP21.71■■□□□ 1.07
HMGCS1-206ENST00000511774 WDR81Q562E7 1941 aa21.7■■□□□ 1.07
HMGCS1-206ENST00000511774 HBP1O60381 514 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 C22orf31O95567 290 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 CLCN5P51795 746 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 CRYBB1P53674 252 aaPredicted RBP21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 CES5AQ6NT32 575 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 TYW1BQ6NUM6 668 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 ZDHHC14Q8IZN3 488 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 SLC39A11Q8N1S5 342 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 SDF4Q9BRK5 362 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 SPG21Q9NZD8 308 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 C2orf16Q68DN1 1984 aa21.7■■□□□ 1.06
HMGCS1-206ENST00000511774 DDX39AO00148 427 aaKnown RBP21.69■■□□□ 1.06
HMGCS1-206ENST00000511774 KIF5BP33176 963 aa21.69■■□□□ 1.06
HMGCS1-206ENST00000511774 MCTP2Q6DN12 878 aa21.69■■□□□ 1.06
HMGCS1-206ENST00000511774 CCDC82Q8N4S0 544 aa21.69■■□□□ 1.06
HMGCS1-206ENST00000511774 FLCNQ8NFG4 579 aa21.69■■□□□ 1.06
HMGCS1-206ENST00000511774 AUTS2Q8WXX7 1259 aa21.69■■□□□ 1.06
HMGCS1-206ENST00000511774 TNPO1Q92973 898 aaKnown RBP21.69■■□□□ 1.06
HMGCS1-206ENST00000511774 TPRP12270 2363 aaKnown RBP21.69■■□□□ 1.06
HMGCS1-206ENST00000511774 MED19A0JLT2 244 aaPredicted RBP21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 NT5C1B-RDH14C9J2C7 533 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 EPCAMP16422 314 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 PPM1AP35813 382 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 MTHFRP42898 656 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 SMC1AQ14683 1233 aaKnown RBP21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 KIAA1841Q6NSI8 718 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 TMEM173Q86WV6 379 aaPredicted RBP21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 ECHDC2Q86YB7 292 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 LRRC43Q8N309 656 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 TDRD5Q8NAT2 981 aaKnown RBP21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 LZTS2Q9BRK4 669 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 MFSD1Q9H3U5 465 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 COL1A2P08123 1366 aa21.68■■□□□ 1.06
HMGCS1-206ENST00000511774 SLC26A2P50443 739 aa21.67■■□□□ 1.06
HMGCS1-206ENST00000511774 KRT17Q04695 432 aa21.67■■□□□ 1.06
HMGCS1-206ENST00000511774 CEP55Q53EZ4 464 aa21.67■■□□□ 1.06
HMGCS1-206ENST00000511774 FAM43BQ6ZT52 329 aaPredicted RBP21.67■■□□□ 1.06
HMGCS1-206ENST00000511774 RNF216Q9NWF9 866 aaPredicted RBP21.67■■□□□ 1.06
HMGCS1-206ENST00000511774 SPTBN2O15020 2390 aa21.67■■□□□ 1.06
HMGCS1-206ENST00000511774 GPR179Q6PRD1 2367 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 MEIS1O00470 390 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 BACH1O14867 736 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 DHX15O43143 795 aaKnown RBP21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 AOC1P19801 751 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 CLCN3P51790 818 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 ZNF484Q5JVG2 852 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 ODR4Q5SWX8 454 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 WWC2Q6AWC2 1192 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 PDXDC2PQ6P474 469 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 HEATR3Q7Z4Q2 680 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 ZNF598Q86UK7 904 aaKnown RBP21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 CCDC105Q8IYK2 499 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 ZNF668Q96K58 619 aaPredicted RBP21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 ADAMTS10Q9H324 1103 aa21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 RWDD1Q9H446 243 aaPredicted RBP21.66■■□□□ 1.06
HMGCS1-206ENST00000511774 SH2B2O14492 632 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms