RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 DTHD1Q6ZMT9 781 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 BANK1Q8NDB2 785 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 CERS4Q9HA82 394 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 CIZ1Q9ULV3 898 aaPredicted RBP17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 PCDHA2Q9Y5H9 948 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 CHD9Q3L8U1 2897 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 VWA3AA6NCI4 1184 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 PP2D1A8MPX8 630 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 RFXAPO00287 272 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 MARCKSP29966 332 aaPredicted RBP17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 TAP1Q03518 808 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 GRIN1Q05586 938 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 EPHA7Q15375 998 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 FBXO47Q5MNV8 452 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 ARL6IP4Q66PJ3 421 aaKnown RBP17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 CKAP2LQ8IYA6 745 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 MAFAQ8NHW3 353 aaPredicted RBP17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 SEPT8Q92599 483 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 DYDC2Q96IM9 177 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 IFIH1Q9BYX4 1025 aaKnown RBP17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 AGO3Q9H9G7 860 aaKnown RBP17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 RGL1Q9NZL6 768 aa17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 WRAP73Q9P2S5 460 aaPredicted RBP17.41■□□□□ 0.38
SH3TC1-220ENST00000511002 SMIM35A0A1B0GVV1 85 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 TLL1O43897 1013 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 GJB5O95377 273 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 C22orf31O95567 290 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 CYP4A11Q02928 519 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 SLC39A14Q15043 492 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 STK38Q15208 465 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 RSPH3Q86UC2 560 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 MYOCDQ8IZQ8 938 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 USP38Q8NB14 1042 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 LINC00301Q8NCQ3 95 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 EIF2AK1Q9BQI3 630 aaKnown RBP17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 CDHR5Q9HBB8 845 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 LRWD1Q9UFC0 647 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 FBXO2Q9UK22 296 aaPredicted RBP17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 COL1A2P08123 1366 aa17.4■□□□□ 0.38
SH3TC1-220ENST00000511002 TMEM150BA6NC51 233 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 YEATS4O95619 227 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 NCLP19338 710 aaKnown RBP17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 CD52P31358 61 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 PRKCEQ02156 737 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 CTTNQ14247 550 aaKnown RBP17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 ZNF484Q5JVG2 852 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 KIAA0319LQ8IZA0 1049 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 LINC01599Q8WXQ3 324 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 BBXQ8WY36 941 aaPredicted RBP17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 PPP1R16BQ96T49 567 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 LXNQ9BS40 222 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 TRPV2Q9Y5S1 764 aa17.39■□□□□ 0.37
SH3TC1-220ENST00000511002 EFCAB14O75071 495 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 MED24O75448 989 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 SLITRK3O94933 977 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 STBD1O95210 358 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 OATP04181 439 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 P4HBP07237 508 aaKnown RBP17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 CDC25AP30304 524 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 QARSP47897 775 aaKnown RBP17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 PSMC5P62195 406 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 PDIA5Q14554 519 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 ATL3Q6DD88 541 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 TMEM40Q8WWA1 233 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 TNPO1Q92973 898 aaKnown RBP17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 CLIC6Q96NY7 704 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 HSD17B14Q9BPX1 270 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 SH2D3AQ9BRG2 576 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 ZBED2Q9BTP6 218 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 RAB34Q9BZG1 259 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 ATP6V1DQ9Y5K8 247 aa17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 MORC2Q9Y6X9 1032 aaPredicted RBP17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 COL4A4P53420 1690 aaPredicted RBP17.38■□□□□ 0.37
SH3TC1-220ENST00000511002 SPTLC2O15270 562 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 AMHP03971 560 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 VTNP04004 478 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 SPATA31C1P0DKV0 1188 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 CLCN3P51790 818 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 KRT85P78386 507 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 TSHZ1Q6ZSZ6 1077 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 RTN4RL1Q86UN2 441 aaPredicted RBP17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 TPH2Q8IWU9 490 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 LRRC71Q8N4P6 559 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 LINC01465Q8N7H1 131 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 ERMNQ8TAM6 284 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 NEK9Q8TD19 979 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 SNX29Q8TEQ0 813 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 MMTAG2Q9BU76 263 aaKnown RBP17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 CELF4Q9BZC1 486 aaKnown RBP17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 CSRNP2Q9H175 543 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 CFAP45Q9UL16 551 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 SRPRBQ9Y5M8 271 aaKnown RBP17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 TTC3P53804 2025 aa17.37■□□□□ 0.37
SH3TC1-220ENST00000511002 PRUNE2Q8WUY3 3088 aa17.36■□□□□ 0.37
SH3TC1-220ENST00000511002 LINC01553A4QN01 128 aa17.36■□□□□ 0.37
SH3TC1-220ENST00000511002 UPP2O95045 317 aa17.36■□□□□ 0.37
SH3TC1-220ENST00000511002 CCT6AP40227 531 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms