RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 DIS3LQ8TF46 1054 aaKnown RBP13.69□□□□□ -0.22
LIN54-210ENST00000510877 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
LIN54-210ENST00000510877 TMEM143Q96AN5 459 aa13.69□□□□□ -0.22
LIN54-210ENST00000510877 C11orf84Q9BUA3 381 aaPredicted RBP13.69□□□□□ -0.22
LIN54-210ENST00000510877 POLR3FQ9H1D9 316 aaPredicted RBP13.69□□□□□ -0.22
LIN54-210ENST00000510877 ALDH8A1Q9H2A2 487 aaPredicted RBP13.69□□□□□ -0.22
LIN54-210ENST00000510877 KANSL3Q9P2N6 904 aa13.69□□□□□ -0.22
LIN54-210ENST00000510877 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
LIN54-210ENST00000510877 INSL6Q9Y581 213 aa13.69□□□□□ -0.22
LIN54-210ENST00000510877 CDY2AQ9Y6F7 541 aa13.69□□□□□ -0.22
LIN54-210ENST00000510877 LAD1O00515 517 aa13.69□□□□□ -0.22
LIN54-210ENST00000510877 DTNBO60941 627 aa13.69□□□□□ -0.22
LIN54-210ENST00000510877 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
LIN54-210ENST00000510877 ACSF2Q96CM8 615 aaPredicted RBP13.69□□□□□ -0.22
LIN54-210ENST00000510877 TFAMQ00059 246 aaKnown RBP13.68□□□□□ -0.22
LIN54-210ENST00000510877 TROAPQ12815 778 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
LIN54-210ENST00000510877 RBM23Q86U06 439 aaKnown RBP13.68□□□□□ -0.22
LIN54-210ENST00000510877 USP38Q8NB14 1042 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 RDH13Q8NBN7 331 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 RDM1Q8NG50 284 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 KIFAP3Q92845 792 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 LGR5O75473 907 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 VTNP04004 478 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 EFNA5P52803 228 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 RRP1BQ14684 758 aaKnown RBP13.68□□□□□ -0.22
LIN54-210ENST00000510877 HS1BP3Q53T59 392 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 IGDCC4Q8TDY8 1250 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 APBB2Q92870 758 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 MTIF2P46199 727 aaKnown RBP13.68□□□□□ -0.22
LIN54-210ENST00000510877 PSMD2Q13200 908 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 NR5A1Q13285 461 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 RGS22Q8NE09 1264 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 Q9Y3F1 56 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 ZNF536O15090 1300 aa13.68□□□□□ -0.22
LIN54-210ENST00000510877 LRG1P02750 347 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 TSPY1Q01534 308 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 TMCO3Q6UWJ1 677 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 FAM133AQ8N9E0 248 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 PPTC7Q8NI37 304 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 RNF34Q969K3 372 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 SENP7Q9BQF6 1050 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 SNX25Q9H3E2 840 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 CLDND1Q9NY35 253 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 ABHD14A-ACY1A0A1B0GW23 586 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 TDP2O95551 362 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 MMP3P08254 477 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 YWHABP31946 246 aaKnown RBP13.67□□□□□ -0.22
LIN54-210ENST00000510877 BTNL9Q6UXG8 535 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 DBF4BQ8NFT6 615 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 UBR3Q6ZT12 1888 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 PSMA7O14818 248 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 RFC2P35250 354 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 NAP1L1P55209 391 aaKnown RBP13.67□□□□□ -0.22
LIN54-210ENST00000510877 GAS2O43903 313 aaKnown RBP13.67□□□□□ -0.22
LIN54-210ENST00000510877 PRPF40AO75400 957 aaKnown RBP13.67□□□□□ -0.22
LIN54-210ENST00000510877 CD19P15391 556 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 SP100P23497 879 aaPredicted RBP13.67□□□□□ -0.22
LIN54-210ENST00000510877 TNNC1P63316 161 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 SCRN1Q12765 414 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 GPM6BQ13491 265 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 NUDT18Q6ZVK8 323 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 RASGRP2Q7LDG7 609 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 NME8Q8N427 588 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 BEST2Q8NFU1 509 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 ANKRD36BP1Q96IX9 119 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 IL23AQ9NPF7 189 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 SYNRGQ9UMZ2 1314 aa13.67□□□□□ -0.22
LIN54-210ENST00000510877 GOLGA6L7A0A1B0GV03 622 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 RAB27AP51159 221 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 PTPN11Q06124 597 aaPredicted RBP13.66□□□□□ -0.22
LIN54-210ENST00000510877 MYO1EQ12965 1108 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 ME3Q16798 604 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 CYP4A22Q5TCH4 519 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 HAUS6Q7Z4H7 955 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 SLC9A7Q96T83 725 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 RIOX1Q9H6W3 641 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 DBR1Q9UK59 544 aaKnown RBP13.66□□□□□ -0.22
LIN54-210ENST00000510877 MRPS6P82932 125 aaKnown RBP13.66□□□□□ -0.22
LIN54-210ENST00000510877 FKBP15Q5T1M5 1219 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 MRPL4Q9BYD3 311 aaKnown RBP13.66□□□□□ -0.22
LIN54-210ENST00000510877 DDX41Q9UJV9 622 aaKnown RBP13.66□□□□□ -0.22
LIN54-210ENST00000510877 SMIM22K7EJ46 135 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 PPP2R3AQ06190 1150 aa13.66□□□□□ -0.22
LIN54-210ENST00000510877 RSRC2Q7L4I2 434 aaKnown RBP13.66□□□□□ -0.22
LIN54-210ENST00000510877 SYMPKQ92797 1274 aaKnown RBP13.66□□□□□ -0.22
LIN54-210ENST00000510877 FOXP1Q9H334 677 aaPredicted RBP13.66□□□□□ -0.22
LIN54-210ENST00000510877 BIRC2Q13490 618 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 TEX2Q8IWB9 1127 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 TXLNBQ8N3L3 684 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 RNPEPQ9H4A4 650 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 GJA9P57773 515 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 STAMQ92783 540 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 APOL5Q9BWW9 433 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 C1orf112Q9NSG2 853 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 RAB23Q9ULC3 237 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 ATP2A1O14983 1001 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms