RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 METTL13Q8N6R0 699 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 ZNF713Q8N859 430 aaPredicted RBP11.83□□□□□ -0.52
DDX41-211ENST00000510171 RASGRP4Q8TDF6 673 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 BBXQ8WY36 941 aaPredicted RBP11.83□□□□□ -0.52
DDX41-211ENST00000510171 MRPS27Q92552 414 aaKnown RBP11.83□□□□□ -0.52
DDX41-211ENST00000510171 ASIC4Q96FT7 647 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 TCF25Q9BQ70 676 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 ESYT1Q9BSJ8 1104 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 TMEM117Q9H0C3 514 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 IRF2BPLQ9H1B7 796 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 NGRNQ9NPE2 291 aaKnown RBP11.83□□□□□ -0.52
DDX41-211ENST00000510171 ENTPD7Q9NQZ7 604 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 BARHL2Q9NY43 387 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 HCSTQ9UBK5 93 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 CNTNAP5Q8WYK1 1306 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 RALGAPA2Q2PPJ7 1873 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 ZBTB42B2RXF5 422 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 FAM86B1E9PN63 330 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 IPO5O00410 1097 aaKnown RBP11.82□□□□□ -0.52
DDX41-211ENST00000510171 MAGEB2O15479 319 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 ZBTB43O43298 467 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 HOXA2O43364 376 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 ST18O60284 1047 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 C22orf31O95567 290 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 VTNP04004 478 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 FAM86B2P0C5J1 330 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 AVPR2P30518 371 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 CLK2P49760 499 aaKnown RBP11.82□□□□□ -0.52
DDX41-211ENST00000510171 FUT2Q10981 343 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 DSC3Q14574 896 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 RNF20Q5VTR2 975 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 JAKMIP3Q5VZ66 844 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 LLGL2Q6P1M3 1020 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 SYCE2Q6PIF2 218 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 TRMT1LQ7Z2T5 733 aaKnown RBP11.82□□□□□ -0.52
DDX41-211ENST00000510171 TMC7Q7Z402 723 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 ZBTB33Q86T24 672 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 ABI1Q8IZP0 508 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 CASD1Q96PB1 797 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 ZNF577Q9BSK1 485 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 APOL5Q9BWW9 433 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 ANO2Q9NQ90 1003 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 TBC1D22BQ9NU19 505 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 CEP131Q9UPN4 1083 aa11.82□□□□□ -0.52
DDX41-211ENST00000510171 MAFBQ9Y5Q3 323 aaPredicted RBP11.82□□□□□ -0.52
DDX41-211ENST00000510171 HIDE1A8MVS5 230 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 PSAPP07602 524 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 CYP3A4P08684 503 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 ZSCAN20P17040 1043 aaPredicted RBP11.81□□□□□ -0.52
DDX41-211ENST00000510171 TMOD1P28289 359 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 PPM1AP35813 382 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 VCPP55072 806 aaKnown RBP11.81□□□□□ -0.52
DDX41-211ENST00000510171 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
DDX41-211ENST00000510171 LRRC55Q6ZSA7 311 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 ZNF558Q96NG5 402 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 SPG21Q9NZD8 308 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 TCEAL9Q9UHQ7 104 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 BRPF3Q9ULD4 1205 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 NR2E1Q9Y466 385 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 PCDHA10Q9Y5I2 948 aa11.81□□□□□ -0.52
DDX41-211ENST00000510171 IGLV3-22A0A075B6J6 115 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 SP100P23497 879 aaPredicted RBP11.8□□□□□ -0.52
DDX41-211ENST00000510171 EIF4BP23588 611 aaKnown RBP11.8□□□□□ -0.52
DDX41-211ENST00000510171 CLCN3P51790 818 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 NLRP11P59045 1033 aaKnown RBP11.8□□□□□ -0.52
DDX41-211ENST00000510171 EXOSC10Q01780 885 aaKnown RBP11.8□□□□□ -0.52
DDX41-211ENST00000510171 TPRNQ4KMQ1 711 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 MCTP2Q6DN12 878 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 CES5AQ6NT32 575 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 EFCAB12Q6NXP0 572 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 CENPQQ7L2Z9 268 aaPredicted RBP11.8□□□□□ -0.52
DDX41-211ENST00000510171 DHX32Q7L7V1 743 aaKnown RBP11.8□□□□□ -0.52
DDX41-211ENST00000510171 ECHDC2Q86YB7 292 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 SMAP1Q8IYB5 467 aaPredicted RBP11.8□□□□□ -0.52
DDX41-211ENST00000510171 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 MRPL43Q8N983 215 aaKnown RBP11.8□□□□□ -0.52
DDX41-211ENST00000510171 CASP10Q92851 521 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 ATOH1Q92858 354 aaPredicted RBP11.8□□□□□ -0.52
DDX41-211ENST00000510171 RIPOR3Q96MK2 946 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 MAP7D2Q96T17 732 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 NRBP2Q9NSY0 501 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 RNF19AQ9NV58 838 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 GABBR1Q9UBS5 961 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 AKT3Q9Y243 479 aa11.8□□□□□ -0.52
DDX41-211ENST00000510171 NLRC5Q86WI3 1866 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 GOLGA8AA7E2F4 631 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 GOLGA8BA8MQT2 603 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 GFRA3O60609 400 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 PBX3P40426 434 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 NUBP1P53384 320 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 SETQ01105 290 aaPredicted RBP11.79□□□□□ -0.52
DDX41-211ENST00000510171 SMC1AQ14683 1233 aaKnown RBP11.79□□□□□ -0.52
DDX41-211ENST00000510171 BMS1Q14692 1282 aaKnown RBP11.79□□□□□ -0.52
DDX41-211ENST00000510171 PFKFB3Q16875 520 aaPredicted RBP11.79□□□□□ -0.52
DDX41-211ENST00000510171 BMP2KLQ5H9B9 411 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 RNF169Q8NCN4 708 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 KREMEN2Q8NCW0 462 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms