RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 BRSK2Q8IWQ3 736 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 PRPF38AQ8NAV1 312 aaKnown RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 SVIPQ8NHG7 77 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 BCL7CQ8WUZ0 217 aaPredicted RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 COPS5Q92905 334 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 OSBP2Q969R2 916 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 PPP1R14AQ96A00 147 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 MISP3Q96FF7 219 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 ALS2CR12Q96Q35 445 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 SLC12A9Q9BXP2 914 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 TRIM4Q9C037 500 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 CCDC68Q9H2F9 335 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 IL20Q9NYY1 176 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 TMED5Q9Y3A6 229 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 SF3B6Q9Y3B4 125 aaKnown RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 YEATS2Q9ULM3 1422 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 TMEM82A0PJX8 343 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 GOLGA6L4A6NEF3 574 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 EIF3FO00303 357 aaPredicted RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 NOP56O00567 594 aaKnown RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 AURKAO14965 403 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 KIF3BO15066 747 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 ZNF189O75820 626 aaPredicted RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 ERLIN2O94905 339 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 LDHCP07864 332 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 RPSAP08865 295 aaKnown RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 DESP17661 470 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 IL4RP24394 825 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 CD96P40200 585 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 RANBP1P43487 201 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 PAPOLAP51003 745 aaKnown RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 ARPC4P59998 168 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 TUBA1BP68363 451 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 CTAG1AP78358 180 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 TEKQ02763 1124 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 NUCB1Q02818 461 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 POU5F1BQ06416 359 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 MAPRE1Q15691 268 aaKnown RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 AOC3Q16853 763 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 CLEC16AQ2KHT3 1053 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 PLEKHG4Q58EX7 1191 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 SH2D4BQ5SQS7 431 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 EMC10Q5UCC4 262 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 EGFLAMQ63HQ2 1017 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 CWF19L1Q69YN2 538 aaKnown RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 TUBA1AQ71U36 451 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 KIAA1958Q8N8K9 716 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 OR8K1Q8NGG5 319 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 PARD3BQ8TEW8 1205 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 MAML1Q92585 1016 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 PPP2R3CQ969Q6 453 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 SLC35B4Q969S0 331 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 RUNDC1Q96C34 613 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 FCRL3Q96P31 734 aaPredicted RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 UBXN6Q9BZV1 441 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 SLC7A5P2Q9GIP4 190 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 ALDH8A1Q9H2A2 487 aaPredicted RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 BHMT2Q9H2M3 363 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 MRPL46Q9H2W6 279 aaKnown RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 ZHX3Q9H4I2 956 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 KIF9Q9HAQ2 790 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 ZNF304Q9HCX3 659 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 FANCLQ9NW38 375 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 UBAP1Q9NZ09 502 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 LRP2BPQ9P2M1 347 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 HDAC6Q9UBN7 1215 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 DUSP13Q9UII6 198 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 GPR55Q9Y2T6 319 aaPredicted RBP5.55□□□□□ -1.52
CCDC30-213ENST00000509712 PCDHA11Q9Y5I1 949 aa5.55□□□□□ -1.52
CCDC30-213ENST00000509712 CUX2O14529 1486 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 SBNO2Q9Y2G9 1366 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 TRAV20A0A0B4J274 112 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 TARSL2A2RTX5 802 aaKnown RBP5.54□□□□□ -1.52
CCDC30-213ENST00000509712 TMEM221A6NGB7 291 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 LIN7AO14910 233 aaPredicted RBP5.54□□□□□ -1.52
CCDC30-213ENST00000509712 HYAL3O43820 417 aaPredicted RBP5.54□□□□□ -1.52
CCDC30-213ENST00000509712 ATP6V1G1O75348 118 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 IFNGR1P15260 489 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 VAV1P15498 845 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 FERP16591 822 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 S100A5P33763 92 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 TCF7P36402 384 aaPredicted RBP5.54□□□□□ -1.52
CCDC30-213ENST00000509712 MATR3P43243 847 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCDC30-213ENST00000509712 AMPD2Q01433 879 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 POU4F1Q01851 419 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 SCRN1Q12765 414 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 CUL4BQ13620 913 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 SEPT2Q15019 361 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 ALDH1L2Q3SY69 923 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 ZC3H12BQ5HYM0 836 aaKnown RBP5.54□□□□□ -1.52
CCDC30-213ENST00000509712 ISM2Q6H9L7 571 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 SLC30A9Q6PML9 568 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 OLFML1Q6UWY5 402 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 ATF7IPQ6VMQ6 1270 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 RNF111Q6ZNA4 994 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 SPRED2Q7Z698 418 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 TTC39CQ8N584 583 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 KREMEN2Q8NCW0 462 aa5.54□□□□□ -1.52
CCDC30-213ENST00000509712 ZSWIM2Q8NEG5 633 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms