RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CBX2Q14781 532 aaPredicted RBP18.09■□□□□ 0.49
RAB40C-202ENST00000509637 NTRK3Q16288 839 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 SLC24A5Q71RS6 500 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 FEZF2Q8TBJ5 459 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 SUSD6Q92537 303 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 EDAQ92838 391 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 CASD1Q96PB1 797 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 ZMYND12Q9H0C1 365 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 S1PR5Q9H228 398 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 LRFN2Q9ULH4 789 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 MRE11P49959 708 aa18.08■□□□□ 0.48
RAB40C-202ENST00000509637 CRYBB1P53674 252 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-202ENST00000509637 UGCGQ16739 394 aa18.08■□□□□ 0.48
RAB40C-202ENST00000509637 DUSP6Q16828 381 aa18.08■□□□□ 0.48
RAB40C-202ENST00000509637 CSPP1Q1MSJ5 1256 aa18.08■□□□□ 0.48
RAB40C-202ENST00000509637 TLE6Q9H808 572 aa18.08■□□□□ 0.48
RAB40C-202ENST00000509637 ESYT2A0FGR8 921 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 hCG_1984214I3L0E3 225 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 FGFR4P22455 802 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 CIITAP33076 1130 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 FAM160B1Q5W0V3 765 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 MIS18BP1Q6P0N0 1132 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 SYCE2Q6PIF2 218 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 LRRC71Q8N4P6 559 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 ZNF713Q8N859 430 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-202ENST00000509637 PRSS33Q8NF86 280 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 PHKBQ93100 1093 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 ZNF577Q9BSK1 485 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
RAB40C-202ENST00000509637 GABBR1Q9UBS5 961 aa18.07■□□□□ 0.48
RAB40C-202ENST00000509637 HIDE1A8MVS5 230 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 CSDE1O75534 798 aaKnown RBP18.06■□□□□ 0.48
RAB40C-202ENST00000509637 STBD1O95210 358 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 ATF7P17544 494 aaPredicted RBP18.06■□□□□ 0.48
RAB40C-202ENST00000509637 NLRP11P59045 1033 aaKnown RBP18.06■□□□□ 0.48
RAB40C-202ENST00000509637 DRP2Q13474 957 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 PRR16Q569H4 304 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 CLLU1OSQ5K130 101 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 ZNF746Q6NUN9 644 aaPredicted RBP18.06■□□□□ 0.48
RAB40C-202ENST00000509637 Q6ZUG5 572 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 TEX2Q8IWB9 1127 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 METTL13Q8N6R0 699 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 BBXQ8WY36 941 aaPredicted RBP18.06■□□□□ 0.48
RAB40C-202ENST00000509637 TNPO1Q92973 898 aaKnown RBP18.06■□□□□ 0.48
RAB40C-202ENST00000509637 CEP89Q96ST8 783 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 APOL5Q9BWW9 433 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 TLR9Q9NR96 1032 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 C1orf112Q9NSG2 853 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 TMEM161AQ9NX61 479 aa18.06■□□□□ 0.48
RAB40C-202ENST00000509637 DENND3A2RUS2 1198 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 TMEM150BA6NC51 233 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 GPR182O15218 404 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
RAB40C-202ENST00000509637 ZXDAP98168 799 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 TRIM67Q6ZTA4 783 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 BMP8AQ7Z5Y6 402 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 MICAL1Q8TDZ2 1067 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 BRF1Q92994 677 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 RPGRIP1Q96KN7 1286 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 POP1Q99575 1024 aaKnown RBP18.05■□□□□ 0.48
RAB40C-202ENST00000509637 ELAC1Q9H777 363 aaKnown RBP18.05■□□□□ 0.48
RAB40C-202ENST00000509637 PCDHB12Q9Y5F1 795 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 SNX14Q9Y5W7 946 aa18.05■□□□□ 0.48
RAB40C-202ENST00000509637 MYO10Q9HD67 2058 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 TMEM221A6NGB7 291 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 M0R296 226 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 MSH4O15457 936 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 METAP2P50579 478 aaKnown RBP eCLIP18.04■□□□□ 0.48
RAB40C-202ENST00000509637 RCAN1P53805 252 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 UBE3AQ05086 875 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 SPOUT1Q5T280 376 aaKnown RBP18.04■□□□□ 0.48
RAB40C-202ENST00000509637 PLPP4Q5VZY2 271 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 EFCAB12Q6NXP0 572 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 TMEM184AQ6ZMB5 413 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 ZNF598Q86UK7 904 aaKnown RBP18.04■□□□□ 0.48
RAB40C-202ENST00000509637 ECHDC2Q86YB7 292 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 CKAP2LQ8IYA6 745 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 PHF7Q9BWX1 381 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-202ENST00000509637 AGXT2Q9BYV1 514 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 ATP6V0A4Q9HBG4 840 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 TBC1D22BQ9NU19 505 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 NAP1L2Q9ULW6 460 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-202ENST00000509637 PCDHA10Q9Y5I2 948 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 NID2Q14112 1375 aa18.04■□□□□ 0.48
RAB40C-202ENST00000509637 ZDBF2Q9HCK1 2354 aa18.03■□□□□ 0.48
RAB40C-202ENST00000509637 PLCB3Q01970 1234 aa18.03■□□□□ 0.48
RAB40C-202ENST00000509637 TARBP2Q15633 366 aaKnown RBP18.03■□□□□ 0.48
RAB40C-202ENST00000509637 KCNT2Q6UVM3 1135 aa18.03■□□□□ 0.48
RAB40C-202ENST00000509637 THNSL1Q8IYQ7 743 aa18.03■□□□□ 0.48
RAB40C-202ENST00000509637 MRPS27Q92552 414 aaKnown RBP18.03■□□□□ 0.48
RAB40C-202ENST00000509637 ASIC4Q96FT7 647 aa18.03■□□□□ 0.48
RAB40C-202ENST00000509637 SH2D3AQ9BRG2 576 aa18.03■□□□□ 0.48
RAB40C-202ENST00000509637 TMEM117Q9H0C3 514 aa18.03■□□□□ 0.48
RAB40C-202ENST00000509637 UNC45AQ9H3U1 944 aa18.03■□□□□ 0.48
RAB40C-202ENST00000509637 NCOA5Q9HCD5 579 aaKnown RBP18.03■□□□□ 0.48
RAB40C-202ENST00000509637 VPS54Q9P1Q0 977 aa18.03■□□□□ 0.48
RAB40C-202ENST00000509637 PSAPP07602 524 aa18.02■□□□□ 0.48
RAB40C-202ENST00000509637 GPC3P51654 580 aa18.02■□□□□ 0.48
RAB40C-202ENST00000509637 TCF15Q12870 199 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms