RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 PGAP2Q9UHJ9 254 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 INTUQ9ULD6 942 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 SPG7Q9UQ90 795 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 ZDHHC9Q9Y397 364 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 MRPS23Q9Y3D9 190 aaKnown RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 PCDHB12Q9Y5F1 795 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 GTPBP10A4D1E9 387 aaKnown RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 DIAPH1O60610 1272 aaKnown RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 TCEA3O75764 348 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 CNOT4O95628 575 aaKnown RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 NUDT3O95989 172 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 KRT18P05783 430 aaKnown RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 MYL3P08590 195 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 RAG1P15918 1043 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 CAPN2P17655 700 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 ENPP1P22413 925 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 RBM5P52756 815 aaKnown RBP eCLIP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 GRAMD1BQ3KR37 738 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 LDLRAD1Q5T700 205 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 HDGFL2Q7Z4V5 671 aaPredicted RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 DAAM2Q86T65 1068 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 C11orf74Q86VG3 221 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 PRIMA1Q86XR5 153 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 CLASRPQ8N2M8 674 aaKnown RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 CCDC191Q8NCU4 936 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 TBC1D20Q96BZ9 403 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 KRTAP4-4Q9BYR3 166 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 IQCGQ9H095 443 aaKnown RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 CCSER2Q9H7U1 834 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 RIC8AQ9NPQ8 531 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 RABL2AQ9UBK7 228 aaPredicted RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 FBLN5Q9UBX5 448 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 FBXL21Q9UKT6 434 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 TNIKQ9UKE5 1360 aa5.24□□□□□ -1.57
NIPBL-206ENST00000509429 BAZ1BQ9UIG0 1483 aaKnown RBP5.24□□□□□ -1.57
NIPBL-206ENST00000509429 C19orf81C9J6K1 198 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 ORC4O43929 436 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 MYL1P05976 194 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 NFATC3Q12968 1075 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 PPP2R5AQ15172 486 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 FILIP1LQ4L180 1135 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 ALFQ53S48 1182 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 SPECC1Q5M775 1068 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 KIAA1614Q5VZ46 1190 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 CWF19L1Q69YN2 538 aaKnown RBP5.23□□□□□ -1.57
NIPBL-206ENST00000509429 PPP4R4Q6NUP7 873 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 CPLX2Q6PUV4 134 aaKnown RBP5.23□□□□□ -1.57
NIPBL-206ENST00000509429 CCBE1Q6UXH8 406 aaPredicted RBP5.23□□□□□ -1.57
NIPBL-206ENST00000509429 TAX1BP1Q86VP1 789 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 IFNL3Q8IZI9 196 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 NEK9Q8TD19 979 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 RPGRQ92834 1020 aaKnown RBP5.23□□□□□ -1.57
NIPBL-206ENST00000509429 CLIP3Q96DZ5 547 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 PTCHD1Q96NR3 888 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 FAM167BQ9BTA0 163 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 TGIF2Q9GZN2 237 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 VPS33BQ9H267 617 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 BARX1Q9HBU1 254 aaPredicted RBP5.23□□□□□ -1.57
NIPBL-206ENST00000509429 BRMS1Q9HCU9 246 aa5.23□□□□□ -1.57
NIPBL-206ENST00000509429 DDX49Q9Y6V7 483 aaKnown RBP5.23□□□□□ -1.57
NIPBL-206ENST00000509429 ABCC8Q09428 1581 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 CEP164Q9UPV0 1460 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 FIBPO43427 364 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 ZNF37AP17032 561 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-206ENST00000509429 VCAM1P19320 739 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 ACO1P21399 889 aaKnown RBP5.22□□□□□ -1.57
NIPBL-206ENST00000509429 DNAJA1P31689 397 aaKnown RBP5.22□□□□□ -1.57
NIPBL-206ENST00000509429 SH3BGRP55822 239 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-206ENST00000509429 COX10Q12887 443 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 TRDNQ13061 729 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 EIF2B5Q13144 721 aaKnown RBP5.22□□□□□ -1.57
NIPBL-206ENST00000509429 ADAM9Q13443 819 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 GPR162Q16538 588 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 COBLL1Q53SF7 1204 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 PLEKHG4Q58EX7 1191 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 ARSHQ5FYA8 562 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 HYIQ5T013 277 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 AGAP9Q5VTM2 703 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 TSHZ3Q63HK5 1081 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 Q6ZSN1 163 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 SNX32Q86XE0 403 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 MIB1Q86YT6 1006 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 MYOCDQ8IZQ8 938 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 NELL1Q92832 810 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 PGBD4Q96DM1 585 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 TBC1D31Q96DN5 1066 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 LMF1Q96S06 567 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 ABCG4Q9H172 646 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 RPAP3Q9H6T3 665 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-206ENST00000509429 PPCSQ9HAB8 311 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 PTPRHQ9HD43 1115 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 MKS1Q9NXB0 559 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 TMOD4Q9NZQ9 345 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 ITM2BQ9Y287 266 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 PPP2R3BQ9Y5P8 575 aa5.22□□□□□ -1.57
NIPBL-206ENST00000509429 CCDC196A0A1B0GTZ2 297 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 FAM221AA4D161 298 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 IQCA1LA6NCM1 817 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 TMEM191CA6NGB0 347 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms