RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CELF4Q9BZC1 486 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 OSBPL7Q9BZF2 842 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 TSPYL2Q9H2G4 693 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 COL1A2P08123 1366 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 KAT6AQ92794 2004 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 PTPRSQ13332 1948 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 A0A087WWV3 80 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 DLL1O00548 723 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 BAG4O95429 457 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 F13A1P00488 732 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 OATP04181 439 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 ZSCAN22P10073 491 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 GCFC2P16383 781 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 TMOD1P28289 359 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 ATP2C1P98194 919 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 PRKCEQ02156 737 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 MGAT3Q09327 533 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 NFX1Q12986 1120 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 PTGDRQ13258 359 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 PPP2R5CQ13362 524 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 CALCRLQ16602 461 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 FOXD4L6Q3SYB3 417 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 FOXD4L3Q6VB84 417 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 ZNF579Q8NAF0 562 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 TET1Q8NFU7 2136 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 TOP1MTQ969P6 601 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 SCLT1Q96NL6 688 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 MAP7D2Q96T17 732 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 PPP1R16BQ96T49 567 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 MMTAG2Q9BU76 263 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 SUGCTQ9HAC7 445 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 RGL1Q9NZL6 768 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 SEPT9Q9UHD8 586 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 AKT3Q9Y243 479 aa9.81□□□□□ -0.84
PDLIM5-213ENST00000509357 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 LINC01553A4QN01 128 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 DDX11L8A8MPP1 907 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 ENPP3O14638 875 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 TBX3O15119 743 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 MAGEB2O15479 319 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 RPS6KA5O75582 802 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 ARHGEF15O94989 841 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 C22orf31O95567 290 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 OR52Z1P0C646 297 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 SPATA31C1P0DKV0 1188 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 CDC25AP30304 524 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 TXKP42681 527 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 TRAPPC10P48553 1259 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 TBC1D8BQ0IIM8 1120 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 GNL2Q13823 731 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 SF3A1Q15459 793 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 KIZQ2M2Z5 673 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 TMEM266Q2M3C6 531 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 ODR4Q5SWX8 454 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 EFCAB12Q6NXP0 572 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 USP49Q70CQ1 688 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 KIAA0319LQ8IZA0 1049 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 BANK1Q8NDB2 785 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 RDM1Q8NG50 284 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 FAM20AQ96MK3 541 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 SH2D3AQ9BRG2 576 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 FTHL17Q9BXU8 183 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 TTC12Q9H892 705 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 AGO3Q9H9G7 860 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 LRFN2Q9ULH4 789 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 PADI3Q9ULW8 664 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 EYSQ5T1H1 3165 aa9.8□□□□□ -0.84
PDLIM5-213ENST00000509357 DENND3A2RUS2 1198 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 EPOPA6NHQ4 379 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 GPR182O15218 404 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 DKC1O60832 514 aaKnown RBP eCLIP9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 MED24O75448 989 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 VTNP04004 478 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 PDCP20941 246 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 TECP42680 631 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 DNM2P50570 870 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 CLCN3P51790 818 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 CEBPZQ03701 1054 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 GRB10Q13322 594 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 MTERF2Q49AM1 385 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 XKR3Q5GH77 459 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 NCAPH2Q6IBW4 605 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 BRAPQ7Z569 592 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 SPRED2Q7Z698 418 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 LRRC71Q8N4P6 559 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 FIBCD1Q8N539 461 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 IGSF22Q8N9C0 903 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 GDPD5Q8WTR4 605 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 DYDC2Q96IM9 177 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 OSMRQ99650 979 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 TFIP11Q9UBB9 837 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 FBXO2Q9UK22 296 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 KIF3AQ9Y496 699 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 SQORQ9Y6N5 450 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 MYO9BQ13459 2157 aa9.79□□□□□ -0.84
PDLIM5-213ENST00000509357 UNC80Q8N2C7 3258 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 CHD9Q3L8U1 2897 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 SLITRK3O94933 977 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 STAG3L1P0CL83 205 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms