RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 SNX29Q8TEQ0 813 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 FOXD4L4Q8WXT5 416 aaPredicted RBP22.53■■□□□ 1.2
HOXC6-204ENST00000509328 SLC7A3Q8WY07 619 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 CCDC43Q96MW1 224 aaKnown RBP22.53■■□□□ 1.2
HOXC6-204ENST00000509328 NACC1Q96RE7 527 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 POLGP54098 1239 aaPredicted RBP22.52■■□□□ 1.2
HOXC6-204ENST00000509328 LRIT3Q3SXY7 679 aa22.52■■□□□ 1.2
HOXC6-204ENST00000509328 PLEKHG4Q58EX7 1191 aa22.52■■□□□ 1.2
HOXC6-204ENST00000509328 FBXO47Q5MNV8 452 aa22.52■■□□□ 1.2
HOXC6-204ENST00000509328 POTEGQ6S5H5 508 aa22.52■■□□□ 1.2
HOXC6-204ENST00000509328 PIGOQ8TEQ8 1089 aa22.52■■□□□ 1.2
HOXC6-204ENST00000509328 ZNF396Q96N95 335 aaPredicted RBP22.52■■□□□ 1.2
HOXC6-204ENST00000509328 USP28Q96RU2 1077 aa22.52■■□□□ 1.2
HOXC6-204ENST00000509328 DHX33Q9H6R0 707 aaKnown RBP22.52■■□□□ 1.2
HOXC6-204ENST00000509328 DBR1Q9UK59 544 aaKnown RBP22.52■■□□□ 1.2
HOXC6-204ENST00000509328 AKT3Q9Y243 479 aa22.52■■□□□ 1.2
HOXC6-204ENST00000509328 SQORQ9Y6N5 450 aa22.52■■□□□ 1.2
HOXC6-204ENST00000509328 PP2D1A8MPX8 630 aa22.51■■□□□ 1.19
HOXC6-204ENST00000509328 BAIAP3O94812 1187 aa22.51■■□□□ 1.19
HOXC6-204ENST00000509328 VTNP04004 478 aa22.51■■□□□ 1.19
HOXC6-204ENST00000509328 RARRES1P49788 294 aa22.51■■□□□ 1.19
HOXC6-204ENST00000509328 CEBPZQ03701 1054 aaKnown RBP22.51■■□□□ 1.19
HOXC6-204ENST00000509328 LPIN1Q14693 890 aa22.51■■□□□ 1.19
HOXC6-204ENST00000509328 USP38Q8NB14 1042 aa22.51■■□□□ 1.19
HOXC6-204ENST00000509328 SEPT8Q92599 483 aa22.51■■□□□ 1.19
HOXC6-204ENST00000509328 AK8Q96MA6 479 aa22.51■■□□□ 1.19
HOXC6-204ENST00000509328 OSBPL7Q9BZF2 842 aa22.51■■□□□ 1.19
HOXC6-204ENST00000509328 MORC2Q9Y6X9 1032 aaPredicted RBP22.51■■□□□ 1.19
HOXC6-204ENST00000509328 ZBBXA8MT70 800 aa22.5■■□□□ 1.19
HOXC6-204ENST00000509328 GAS2O43903 313 aaKnown RBP22.5■■□□□ 1.19
HOXC6-204ENST00000509328 GHRP10912 638 aa22.5■■□□□ 1.19
HOXC6-204ENST00000509328 CDC25AP30304 524 aa22.5■■□□□ 1.19
HOXC6-204ENST00000509328 MKRN4PQ13434 485 aaPredicted RBP22.5■■□□□ 1.19
HOXC6-204ENST00000509328 IKBKEQ14164 716 aa22.5■■□□□ 1.19
HOXC6-204ENST00000509328 EMC2Q15006 297 aa22.5■■□□□ 1.19
HOXC6-204ENST00000509328 TSHZ1Q6ZSZ6 1077 aa22.5■■□□□ 1.19
HOXC6-204ENST00000509328 DBF4BQ8NFT6 615 aa22.5■■□□□ 1.19
HOXC6-204ENST00000509328 APBB2Q92870 758 aa22.5■■□□□ 1.19
HOXC6-204ENST00000509328 MMTAG2Q9BU76 263 aaKnown RBP22.5■■□□□ 1.19
HOXC6-204ENST00000509328 IFIH1Q9BYX4 1025 aaKnown RBP22.5■■□□□ 1.19
HOXC6-204ENST00000509328 CXXC1Q9P0U4 656 aaPredicted RBP22.5■■□□□ 1.19
HOXC6-204ENST00000509328 KIAA1024Q9UPX6 916 aa22.5■■□□□ 1.19
HOXC6-204ENST00000509328 A0A087WWV3 80 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 ABHD14A-ACY1A0A1B0GW23 586 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 EFCAB14O75071 495 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 GPR32O75388 356 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 DGAT1O75907 488 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 LONP1P36776 959 aaKnown RBP22.49■■□□□ 1.19
HOXC6-204ENST00000509328 NASPP49321 788 aaPredicted RBP22.49■■□□□ 1.19
HOXC6-204ENST00000509328 CRYBB1P53674 252 aaPredicted RBP22.49■■□□□ 1.19
HOXC6-204ENST00000509328 CDC42EP1Q00587 391 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 DRP2Q13474 957 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 ECM1Q16610 540 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 KIZQ2M2Z5 673 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 TCTN1Q2MV58 587 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 DDX19AQ9NUU7 478 aaKnown RBP22.49■■□□□ 1.19
HOXC6-204ENST00000509328 SUCLA2Q9P2R7 463 aaPredicted RBP22.49■■□□□ 1.19
HOXC6-204ENST00000509328 GINS2Q9Y248 185 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 SLC4A7Q9Y6M7 1214 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 PTPRSQ13332 1948 aa22.49■■□□□ 1.19
HOXC6-204ENST00000509328 GBF1Q92538 1859 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 SLC26A4O43511 780 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 BRD1O95696 1058 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 MARCKSP29966 332 aaPredicted RBP22.48■■□□□ 1.19
HOXC6-204ENST00000509328 NLRP11P59045 1033 aaKnown RBP22.48■■□□□ 1.19
HOXC6-204ENST00000509328 SLC39A14Q15043 492 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 TCP11Q8WWU5 503 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 PPP1R16BQ96T49 567 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 MTRQ99707 1265 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 ADAMTS10Q9H324 1103 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 CDHR5Q9HBB8 845 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 ATP6V0A4Q9HBG4 840 aa22.48■■□□□ 1.19
HOXC6-204ENST00000509328 GPC3P51654 580 aa22.47■■□□□ 1.19
HOXC6-204ENST00000509328 HYIQ5T013 277 aa22.47■■□□□ 1.19
HOXC6-204ENST00000509328 ATL3Q6DD88 541 aa22.47■■□□□ 1.19
HOXC6-204ENST00000509328 KCTD17Q8N5Z5 321 aa22.47■■□□□ 1.19
HOXC6-204ENST00000509328 OSMRQ99650 979 aa22.47■■□□□ 1.19
HOXC6-204ENST00000509328 NT5C3AQ9H0P0 336 aa22.47■■□□□ 1.19
HOXC6-204ENST00000509328 AGO3Q9H9G7 860 aaKnown RBP22.47■■□□□ 1.19
HOXC6-204ENST00000509328 BMP2KQ9NSY1 1161 aaPredicted RBP22.47■■□□□ 1.19
HOXC6-204ENST00000509328 TFIP11Q9UBB9 837 aaKnown RBP22.47■■□□□ 1.19
HOXC6-204ENST00000509328 FBXO2Q9UK22 296 aaPredicted RBP22.47■■□□□ 1.19
HOXC6-204ENST00000509328 SRPRBQ9Y5M8 271 aaKnown RBP22.47■■□□□ 1.19
HOXC6-204ENST00000509328 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.46■■□□□ 1.19
HOXC6-204ENST00000509328 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.46■■□□□ 1.19
HOXC6-204ENST00000509328 ARHGEF35A5YM69 484 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 UBA7P41226 1012 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 KCNJ6P48051 423 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 WDR5P61964 334 aaKnown RBP22.46■■□□□ 1.19
HOXC6-204ENST00000509328 GRIN1Q05586 938 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 PAK2Q13177 524 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 STK38Q15208 465 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 ODR4Q5SWX8 454 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 FAM43BQ6ZT52 329 aaPredicted RBP22.46■■□□□ 1.19
HOXC6-204ENST00000509328 CABP7Q86V35 215 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 RHPN2Q8IUC4 686 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 LINC00301Q8NCQ3 95 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 PSPC1Q8WXF1 523 aaKnown RBP22.46■■□□□ 1.19
HOXC6-204ENST00000509328 TMEM143Q96AN5 459 aa22.46■■□□□ 1.19
HOXC6-204ENST00000509328 SCLT1Q96NL6 688 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms