RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 SYDE2Q5VT97 1194 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 FAM109BQ6ICB4 259 aaPredicted RBP8.7□□□□□ -1.02
CCSER1-208ENST00000509109 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 NOL8Q76FK4 1167 aaKnown RBP8.7□□□□□ -1.02
CCSER1-208ENST00000509109 IQCA1Q86XH1 822 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 MAP4K3Q8IVH8 894 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 CACTIN-AS1Q8N1I8 211 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 Q8N3U1 123 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 KLHDC9Q8NEP7 349 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 BADQ92934 168 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 SEZ6LQ9BYH1 1024 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
CCSER1-208ENST00000509109 UPF3AQ9H1J1 476 aaKnown RBP8.7□□□□□ -1.02
CCSER1-208ENST00000509109 RANBP17Q9H2T7 1088 aaKnown RBP8.7□□□□□ -1.02
CCSER1-208ENST00000509109 VTA1Q9NP79 307 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 TMEM39AQ9NV64 488 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 STXBP5LQ9Y2K9 1186 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 ZNF536O15090 1300 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 CHD9Q3L8U1 2897 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 LCTP09848 1927 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 MYH6P13533 1939 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 A0A0U1RQG5 324 aaPredicted RBP8.69□□□□□ -1.02
CCSER1-208ENST00000509109 B4DLN1 442 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 F8W735 103 aaPredicted RBP8.69□□□□□ -1.02
CCSER1-208ENST00000509109 TNFRSF21O75509 655 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 CABYRO75952 493 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 ASGR1P07306 291 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 H2AFB1P0C5Y9 115 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 H2AFB2P0C5Z0 115 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 SDSP20132 328 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 MRPL12P52815 198 aaKnown RBP8.69□□□□□ -1.02
CCSER1-208ENST00000509109 HAND2P61296 217 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 CNTN2Q02246 1040 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 TNFAIP2Q03169 654 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 FPGSQ05932 587 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 KCNA10Q16322 511 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 IMMTQ16891 758 aaKnown RBP8.69□□□□□ -1.02
CCSER1-208ENST00000509109 BTNL9Q6UXG8 535 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 NSMFQ6X4W1 530 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 TLK2Q86UE8 772 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 ZNF589Q86UQ0 364 aaPredicted RBP8.69□□□□□ -1.02
CCSER1-208ENST00000509109 SLC17A8Q8NDX2 589 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 CHMP4CQ96CF2 233 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 RNPC3Q96LT9 517 aaKnown RBP8.69□□□□□ -1.02
CCSER1-208ENST00000509109 FGD4Q96M96 766 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 TMEM47Q9BQJ4 181 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 AP5M1Q9H0R1 490 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 SRA1Q9HD15 236 aaKnown RBP8.69□□□□□ -1.02
CCSER1-208ENST00000509109 KCNK4Q9NYG8 393 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 CYP39A1Q9NYL5 469 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 CTNNA3Q9UI47 895 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 WDR19Q8NEZ3 1342 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 RAD50Q92878 1312 aa8.69□□□□□ -1.02
CCSER1-208ENST00000509109 TRANK1O15050 2925 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 VCANP13611 3396 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 TMEM265A0A087WTH1 108 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 TRIM43BA6NCK2 446 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 PHACTR2O75167 634 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 WISP1O95388 367 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 PDHBP11177 359 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 NKX3-2P78367 333 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 SMAD3P84022 425 aaKnown RBP8.68□□□□□ -1.02
CCSER1-208ENST00000509109 ZNF543Q08ER8 600 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 FSCN1Q16658 493 aaKnown RBP8.68□□□□□ -1.02
CCSER1-208ENST00000509109 FOXD4L6Q3SYB3 417 aaPredicted RBP8.68□□□□□ -1.02
CCSER1-208ENST00000509109 BRDTQ58F21 947 aaPredicted RBP8.68□□□□□ -1.02
CCSER1-208ENST00000509109 CCSAPQ6IQ19 270 aaPredicted RBP8.68□□□□□ -1.02
CCSER1-208ENST00000509109 CWC27Q6UX04 472 aaKnown RBP8.68□□□□□ -1.02
CCSER1-208ENST00000509109 FOXD4L3Q6VB84 417 aaPredicted RBP8.68□□□□□ -1.02
CCSER1-208ENST00000509109 Q7L0L9 218 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 DGKHQ86XP1 1220 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 TRIM43Q96BQ3 446 aaPredicted RBP8.68□□□□□ -1.02
CCSER1-208ENST00000509109 MAF1Q9H063 256 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 KATNBL1Q9H079 304 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 CNNM2Q9H8M5 875 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 INCENPQ9NQS7 918 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 DZANK1Q9NVP4 752 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 MTMR10Q9NXD2 777 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 Q9Y3F1 56 aa8.68□□□□□ -1.02
CCSER1-208ENST00000509109 FRMPD2Q68DX3 1309 aaPredicted RBP8.68□□□□□ -1.02
CCSER1-208ENST00000509109 PTPDC1A2A3K4 754 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 MYADML2A6NDP7 307 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 H3BRB1 525 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 ARVCFO00192 962 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 FSCN2O14926 492 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 DDX3YO15523 660 aaKnown RBP8.67□□□□□ -1.02
CCSER1-208ENST00000509109 ADCY6O43306 1168 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 TIMP1P01033 207 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 SNHG28P0DPA3 235 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 CD68P34810 354 aaPredicted RBP8.67□□□□□ -1.02
CCSER1-208ENST00000509109 SLC16A2P36021 539 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 NEDD4P46934 1319 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 CPT1AP50416 773 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 FAAP100Q0VG06 881 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 PPIGQ13427 754 aaKnown RBP eCLIP8.67□□□□□ -1.02
CCSER1-208ENST00000509109 SHHQ15465 462 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 ASPRV1Q53RT3 343 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 MUM1L1Q5H9M0 696 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 IQSEC1Q6DN90 963 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 FAM117BQ6P1L5 589 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms