RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 MRPS23Q9Y3D9 190 aaKnown RBP6.74□□□□□ -1.33
LINC01088-205ENST00000509088 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-205ENST00000509088 DPTQ07507 201 aa6.73□□□□□ -1.33
LINC01088-205ENST00000509088 KRTAP1-1Q07627 177 aa6.73□□□□□ -1.33
LINC01088-205ENST00000509088 SAFB2Q14151 953 aaKnown RBP eCLIP6.73□□□□□ -1.336e-7■■■□□ 15.9
LINC01088-205ENST00000509088 ZC3H7AQ8IWR0 971 aaKnown RBP6.73□□□□□ -1.33
LINC01088-205ENST00000509088 GSTCDQ8NEC7 633 aa6.73□□□□□ -1.33
LINC01088-205ENST00000509088 DLG3Q92796 817 aa6.73□□□□□ -1.33
LINC01088-205ENST00000509088 PLEKHG4BQ96PX9 1271 aa6.73□□□□□ -1.33
LINC01088-205ENST00000509088 ZNF703Q9H7S9 590 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-205ENST00000509088 COQ6Q9Y2Z9 468 aa6.73□□□□□ -1.33
LINC01088-205ENST00000509088 SCDO00767 359 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 RASGRP1O95267 797 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 MCM7P33993 719 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 GRM7Q14831 915 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 FAM47CQ5HY64 1035 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 PCSK4Q6UW60 755 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 LDLRAD3Q86YD5 345 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 DNAJC7Q99615 494 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 KANSL2Q9H9L4 492 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 KCNH7Q9NS40 1196 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 C11orf21Q9P2W6 132 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 B3GALT1Q9Y5Z6 326 aa6.72□□□□□ -1.33
LINC01088-205ENST00000509088 PRAMEF22A3QJZ6 481 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 PMS2P1A4D2B8 440 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 SLC26A4O43511 780 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 MAFO75444 373 aaPredicted RBP6.71□□□□□ -1.34
LINC01088-205ENST00000509088 KCNA6P17658 529 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 NAT1P18440 290 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 HIBADHP31937 336 aaKnown RBP6.71□□□□□ -1.34
LINC01088-205ENST00000509088 NFE2L2Q16236 605 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 CATSPEREQ5SY80 951 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 GRAMD4Q6IC98 578 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 OVCH1Q7RTY7 1134 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 LRP10Q7Z4F1 713 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 JAZF1Q86VZ6 243 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 LILRB2Q8N423 598 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 SLC7A14Q8TBB6 771 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 LARP4BQ92615 738 aaKnown RBP6.71□□□□□ -1.34
LINC01088-205ENST00000509088 SCLYQ96I15 445 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 GBP4Q96PP9 640 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 CELF4Q9BZC1 486 aaKnown RBP6.71□□□□□ -1.34
LINC01088-205ENST00000509088 NELFAQ9H3P2 528 aa6.71□□□□□ -1.34
LINC01088-205ENST00000509088 WDR33Q9C0J8 1336 aaKnown RBP6.71□□□□□ -1.34
LINC01088-205ENST00000509088 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 GSTA4O15217 222 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 SDHAP31040 664 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 MEOX1P50221 254 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 TUBA3CQ13748 450 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 LONRF2Q1L5Z9 754 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 ABHD17CQ6PCB6 329 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 TUBA3EQ6PEY2 450 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 Q6ZPA2 131 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 NOP9Q86U38 636 aaKnown RBP6.7□□□□□ -1.34
LINC01088-205ENST00000509088 RTKN2Q8IZC4 609 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 NEU4Q8WWR8 484 aaPredicted RBP6.7□□□□□ -1.34
LINC01088-205ENST00000509088 FOXRED1Q96CU9 486 aaPredicted RBP6.7□□□□□ -1.34
LINC01088-205ENST00000509088 MRFAP1L1Q96HT8 127 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 CEP89Q96ST8 783 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 MMRN2Q9H8L6 949 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 ASB1Q9Y576 335 aa6.7□□□□□ -1.34
LINC01088-205ENST00000509088 CTDP1Q9Y5B0 961 aaPredicted RBP6.7□□□□□ -1.34
LINC01088-205ENST00000509088 GOLGA6L22H0YM25 854 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 FOXP2O15409 715 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 ADAM8P78325 824 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 PURAQ00577 322 aaKnown RBP6.69□□□□□ -1.34
LINC01088-205ENST00000509088 RIN1Q13671 783 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 SMN1Q16637 294 aaKnown RBP6.69□□□□□ -1.34
LINC01088-205ENST00000509088 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 TRIM61Q5EBN2 209 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 EP400NLQ6ZTU2 488 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 ZNF627Q7L945 461 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 ADGRE4PQ86SQ3 457 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 RTN4RL1Q86UN2 441 aaPredicted RBP6.69□□□□□ -1.34
LINC01088-205ENST00000509088 TMEM176AQ96HP8 235 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 PKNOX2Q96KN3 472 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 NDOR1Q9UHB4 597 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 TBX22Q9Y458 520 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 KDM2BQ8NHM5 1336 aa6.69□□□□□ -1.34
LINC01088-205ENST00000509088 STAT3P40763 770 aa6.68□□□□□ -1.34
LINC01088-205ENST00000509088 INHBEP58166 350 aa6.68□□□□□ -1.34
LINC01088-205ENST00000509088 TMPRSS6Q8IU80 811 aa6.68□□□□□ -1.34
LINC01088-205ENST00000509088 D2HGDHQ8N465 521 aa6.68□□□□□ -1.34
LINC01088-205ENST00000509088 RNPC3Q96LT9 517 aaKnown RBP6.68□□□□□ -1.34
LINC01088-205ENST00000509088 SH3BP1Q9Y3L3 701 aa6.68□□□□□ -1.34
LINC01088-205ENST00000509088 MRPL42Q9Y6G3 142 aaKnown RBP6.68□□□□□ -1.34
LINC01088-205ENST00000509088 KRT4P19013 534 aa6.67□□□□□ -1.34
LINC01088-205ENST00000509088 ADAM15Q13444 863 aa6.67□□□□□ -1.34
LINC01088-205ENST00000509088 ACAP1Q15027 740 aa6.67□□□□□ -1.34
LINC01088-205ENST00000509088 HIPK4Q8NE63 616 aa6.67□□□□□ -1.34
LINC01088-205ENST00000509088 ZNF483Q8TF39 744 aaPredicted RBP6.67□□□□□ -1.34
LINC01088-205ENST00000509088 FAM184BQ9ULE4 1060 aa6.67□□□□□ -1.34
LINC01088-205ENST00000509088 TLDC2A0PJX2 215 aa6.66□□□□□ -1.34
LINC01088-205ENST00000509088 CAPN14A8MX76 684 aa6.66□□□□□ -1.34
LINC01088-205ENST00000509088 ZBTB48P10074 688 aaPredicted RBP6.66□□□□□ -1.34
LINC01088-205ENST00000509088 TGM1P22735 817 aa6.66□□□□□ -1.34
LINC01088-205ENST00000509088 DEKP35659 375 aaKnown RBP6.66□□□□□ -1.34
LINC01088-205ENST00000509088 INHBCP55103 352 aa6.66□□□□□ -1.34
LINC01088-205ENST00000509088 SLC25A3Q00325 362 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms