RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TCF20Q9UGU0 1960 aaKnown RBP16.68■□□□□ 0.26
UBE2D3-228ENST00000508974 MARCH6O60337 910 aa16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 CSPG5O95196 566 aa16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 POU3F3P20264 500 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 CTNNB1P35222 781 aa16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 PAN2Q504Q3 1202 aaKnown RBP16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 TJAP1Q5JTD0 557 aa16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 CCDC83Q8IWF9 413 aa16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 TMEM192Q8IY95 271 aa16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 FTHL17Q9BXU8 183 aa16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 BRMS1Q9HCU9 246 aa16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 SQORQ9Y6N5 450 aa16.67■□□□□ 0.26
UBE2D3-228ENST00000508974 ARID2Q68CP9 1835 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 EML1O00423 815 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 MGEA5O60502 916 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 GATMP50440 423 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 NLRP11P59045 1033 aaKnown RBP16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 GUCY1B3Q02153 619 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 TBC1D8BQ0IIM8 1120 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 TRIM29Q14134 588 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 BTG3Q14201 252 aaPredicted RBP16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 B3GNT9Q6UX72 402 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 SPDYE1Q8NFV5 336 aaPredicted RBP16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 SCLT1Q96NL6 688 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 MAP7D2Q96T17 732 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 ERVK-5Q9HDB9 667 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 ST3GAL5Q9UNP4 418 aa16.66■□□□□ 0.26
UBE2D3-228ENST00000508974 FNDC1Q4ZHG4 1894 aaPredicted RBP16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 DENND3A2RUS2 1198 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 DDX11L8A8MPP1 907 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 BTBD18B2RXH4 712 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 MAGEB2O15479 319 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 GPR32O75388 356 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 MMP1P03956 469 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 GCFC2P16383 781 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 TMOD1P28289 359 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 CRYBB1P53674 252 aaPredicted RBP16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 MRPS5P82675 430 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 GPM6BQ13491 265 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 PLA2G4FQ68DD2 849 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 NCAPH2Q6IBW4 605 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 PPP4R3AQ6IN85 833 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 FAM228AQ86W67 206 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 PIP4P2Q8N4L2 257 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 IL27Q8NEV9 243 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 RDM1Q8NG50 284 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 ATXN2LQ8WWM7 1075 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 TNFRSF25Q93038 417 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 ASB2Q96Q27 587 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 ADAM2Q99965 735 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 RC3H2Q9HBD1 1191 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 VAV3Q9UKW4 847 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 LRFN2Q9ULH4 789 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 LIMCH1Q9UPQ0 1083 aa16.65■□□□□ 0.26
UBE2D3-228ENST00000508974 DGKIO75912 1065 aa16.64■□□□□ 0.25
UBE2D3-228ENST00000508974 FGFR4P22455 802 aa16.64■□□□□ 0.25
UBE2D3-228ENST00000508974 KCNQ1P51787 676 aa16.64■□□□□ 0.25
UBE2D3-228ENST00000508974 DRP2Q13474 957 aa16.64■□□□□ 0.25
UBE2D3-228ENST00000508974 XKR3Q5GH77 459 aa16.64■□□□□ 0.25
UBE2D3-228ENST00000508974 NPAS4Q8IUM7 802 aa16.64■□□□□ 0.25
UBE2D3-228ENST00000508974 LINC01465Q8N7H1 131 aa16.64■□□□□ 0.25
UBE2D3-228ENST00000508974 HAS1Q92839 578 aa16.64■□□□□ 0.25
UBE2D3-228ENST00000508974 SAMD11Q96NU1 681 aa16.64■□□□□ 0.25
UBE2D3-228ENST00000508974 H3BNC9 293 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 GPR182O15218 404 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 STBD1O95210 358 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 STAG3L1P0CL83 205 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 PSMC5P62195 406 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 PPP2R5CQ13362 524 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 NLRP7Q8WX94 980 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 ZNF689Q96CS4 500 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 FAM20AQ96MK3 541 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 KIF2CQ99661 725 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 NAP1L4Q99733 375 aaKnown RBP16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 BMP2KQ9NSY1 1161 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 LMCD1Q9NZU5 365 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 MRPL42Q9Y6G3 142 aaKnown RBP16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 PLXNA4Q9HCM2 1894 aa16.63■□□□□ 0.25
UBE2D3-228ENST00000508974 WNT7AO00755 349 aa16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 CSDE1O75534 798 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 ATP2B1P20020 1258 aa16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 SARSP49591 514 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 GPC3P51654 580 aa16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 CYP4A11Q02928 519 aa16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 TARBP2Q15633 366 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 ODR4Q5SWX8 454 aa16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 ANO5Q75V66 913 aa16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 HLA-CQ95604 372 aa16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 MRPL38Q96DV4 380 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 NIFKQ9BYG3 293 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 ADAMTS10Q9H324 1103 aa16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 WRAP73Q9P2S5 460 aaPredicted RBP16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 PCDHB7Q9Y5E2 793 aa16.62■□□□□ 0.25
UBE2D3-228ENST00000508974 BAG4O95429 457 aaKnown RBP16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 LINC00271P0C7V0 271 aa16.61■□□□□ 0.25
UBE2D3-228ENST00000508974 BMPR1AP36894 532 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms