RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ZBTB10Q96DT7 871 aa15.34■□□□□ 0.05
CCHCR1-227ENST00000508852 NECAB3Q96P71 396 aaPredicted RBP15.34■□□□□ 0.05
CCHCR1-227ENST00000508852 ADAM2Q99965 735 aa15.34■□□□□ 0.05
CCHCR1-227ENST00000508852 JPH2Q9BR39 696 aaPredicted RBP15.34■□□□□ 0.05
CCHCR1-227ENST00000508852 NCOA5Q9HCD5 579 aaKnown RBP15.34■□□□□ 0.05
CCHCR1-227ENST00000508852 PLAGL2Q9UPG8 496 aa15.34■□□□□ 0.05
CCHCR1-227ENST00000508852 AKT3Q9Y243 479 aa15.34■□□□□ 0.05
CCHCR1-227ENST00000508852 NOC2LQ9Y3T9 749 aaKnown RBP15.34■□□□□ 0.05
CCHCR1-227ENST00000508852 CARNS1A5YM72 827 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 GRM6O15303 877 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 GPR32O75388 356 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 COL9A1P20849 921 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 DNM2P50570 870 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 NONOQ15233 471 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 KIZQ2M2Z5 673 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 PDE12Q6L8Q7 609 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 EFCAB12Q6NXP0 572 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 MIER3Q7Z3K6 550 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 FAM178BQ8IXR5 827 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 WASF1Q92558 559 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 TMX1Q9H3N1 280 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 ATP6V0A4Q9HBG4 840 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 TMEM161AQ9NX61 479 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 CLDND1Q9NY35 253 aa15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 MRPL42Q9Y6G3 142 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-227ENST00000508852 KIAA1671Q9BY89 1806 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 FNDC1Q4ZHG4 1894 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 C9IYK1 514 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 ALADP13716 330 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 EIF4BP23588 611 aaKnown RBP15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 FAM189BP81408 668 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 PRKCEQ02156 737 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 TBC1D8BQ0IIM8 1120 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 TMEM266Q2M3C6 531 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 CTC1Q2NKJ3 1217 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 XKR3Q5GH77 459 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 SPOUT1Q5T280 376 aaKnown RBP15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 EP400NLQ6ZTU2 488 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 GJD3Q8N144 294 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 POP1Q99575 1024 aaKnown RBP15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 OSMRQ99650 979 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 UPF3BQ9BZI7 483 aaKnown RBP15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 INO80BQ9C086 356 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 SLKQ9H2G2 1235 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 ARIH1Q9Y4X5 557 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 PPME1Q9Y570 386 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 STK36Q9NRP7 1315 aa15.32■□□□□ 0.04
CCHCR1-227ENST00000508852 CCDC194A0A1B0GVG4 234 aa15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 PSMD10O75832 226 aa15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 NLRP11P59045 1033 aaKnown RBP15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 FAM228AQ86W67 206 aa15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 LINC01465Q8N7H1 131 aa15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 SPPL3Q8TCT6 385 aa15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 FAM20AQ96MK3 541 aa15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 MBOAT7Q96N66 472 aa15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 NIFKQ9BYG3 293 aaKnown RBP15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 UNC45AQ9H3U1 944 aa15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 DACT1Q9NYF0 836 aa15.31■□□□□ 0.04
CCHCR1-227ENST00000508852 TBKBP1A7MCY6 615 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 PI4K2BG5E9Z4 385 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 M0R2N6 131 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 ADAMTS3O15072 1205 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 CHMP2AO43633 222 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 GPR37L1O60883 481 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 VTNP04004 478 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 LAG3P18627 525 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 SSTR3P32745 418 aaPredicted RBP15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 ATG2AQ2TAZ0 1938 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 PAN2Q504Q3 1202 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 TMEM31Q5JXX7 168 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 PPP4R3AQ6IN85 833 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 ABI1Q8IZP0 508 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 KLHL23Q8NBE8 558 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 TMEM40Q8WWA1 233 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 SCLT1Q96NL6 688 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 CDCA3Q99618 268 aaPredicted RBP15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 TMEM117Q9H0C3 514 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 CDHR5Q9HBB8 845 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 BRMS1Q9HCU9 246 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 ALG13Q9NP73 1137 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 CHST12Q9NRB3 414 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 DDX25Q9UHL0 483 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 PUF60Q9UHX1 559 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 LZTS1Q9Y250 596 aa15.3■□□□□ 0.04
CCHCR1-227ENST00000508852 H3BQ06 376 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 TBX3O15119 743 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 ZNF862O60290 1169 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 PFKFB2O60825 505 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 EOMESO95936 686 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 ITGB1P05556 798 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 SRGAP2BP0DMP2 458 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 SKIP12755 728 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 PPM1AP35813 382 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 GPC3P51654 580 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 CLCN3P51790 818 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 PSMC5P62195 406 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 HYAL1Q12794 435 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 STK3Q13188 491 aa15.29■□□□□ 0.04
CCHCR1-227ENST00000508852 DSC3Q14574 896 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms