RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 MTRQ99707 1265 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 WNT8AQ9H1J5 351 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 SUGCTQ9HAC7 445 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 ATP6V0A4Q9HBG4 840 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 CCDC39Q9UFE4 941 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 CIZ1Q9ULV3 898 aaPredicted RBP10.19□□□□□ -0.78
NUP54-207ENST00000508583 SRPRBQ9Y5M8 271 aaKnown RBP10.19□□□□□ -0.78
NUP54-207ENST00000508583 TRPV2Q9Y5S1 764 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 CLIC4Q9Y696 253 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 EVPLQ92817 2033 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 UMODL1Q5DID0 1318 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 SPTLC2O15270 562 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 ASAP2O43150 1006 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 MAFO75444 373 aaPredicted RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 MED24O75448 989 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 FGBP02675 491 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 CTSHP09668 335 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 SPATA31C1P0DKV0 1188 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 RARRES1P49788 294 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 CEBPZQ03701 1054 aaKnown RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 MXD4Q14582 209 aaPredicted RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 EMC2Q15006 297 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 PTPAQ15257 358 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 FOXD4L5Q5VV16 416 aaPredicted RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 PLA2G4FQ68DD2 849 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 CNKSR3Q6P9H4 555 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 ZNF410Q86VK4 478 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 KIAA0319LQ8IZA0 1049 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 PSPC1Q8WXF1 523 aaKnown RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 FOXD4L4Q8WXT5 416 aaPredicted RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 SCLYQ96I15 445 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 RNPC3Q96LT9 517 aaKnown RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 USP28Q96RU2 1077 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 TIPINQ9BVW5 301 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 CELF4Q9BZC1 486 aaKnown RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 INO80BQ9C086 356 aaPredicted RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 SCAND2PQ9GZW5 306 aaPredicted RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 DHX33Q9H6R0 707 aaKnown RBP10.18□□□□□ -0.78
NUP54-207ENST00000508583 KCND2Q9NZV8 630 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 CDY2AQ9Y6F7 541 aa10.18□□□□□ -0.78
NUP54-207ENST00000508583 RANBP2P49792 3224 aaKnown RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 IGKV6-21A0A0C4DH24 114 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 ABHD14A-ACY1A0A1B0GW23 586 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 STBD1O95210 358 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 CXCL10P02778 98 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 MARCKSP29966 332 aaPredicted RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 CLCN3P51790 818 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 CRYBB1P53674 252 aaPredicted RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 NPEPPSP55786 919 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 IKBKEQ14164 716 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 TFDP1Q14186 410 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 PCBP1Q15365 356 aaKnown RBP eCLIP10.17□□□□□ -0.78
NUP54-207ENST00000508583 ZRSR1Q15695 479 aaKnown RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 HYIQ5T013 277 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 FAM173BQ6P4H8 233 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 TSHZ1Q6ZSZ6 1077 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 DEFB128Q7Z7B8 93 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 CABP7Q86V35 215 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 LINC00301Q8NCQ3 95 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 PIGOQ8TEQ8 1089 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 HERVK_113Q902F9 699 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 PYM1Q9BRP8 204 aaKnown RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 FTHL17Q9BXU8 183 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 IFIH1Q9BYX4 1025 aaKnown RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 CCSER1Q9C0I3 900 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 DDX19AQ9NUU7 478 aaKnown RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 SUCLA2Q9P2R7 463 aaPredicted RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 KCNG1Q9UIX4 513 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 FBXO2Q9UK22 296 aaPredicted RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 KIAA1024Q9UPX6 916 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 COLQQ9Y215 455 aaPredicted RBP10.17□□□□□ -0.78
NUP54-207ENST00000508583 ARID2Q68CP9 1835 aa10.17□□□□□ -0.78
NUP54-207ENST00000508583 RBAK-RBAKDNI3L0D1 243 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 GPR182O15218 404 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 EYA4O95677 639 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 CHRNA1P02708 482 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 NCLP19338 710 aaKnown RBP10.16□□□□□ -0.78
NUP54-207ENST00000508583 KCNJ6P48051 423 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 ME1P48163 572 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 NLRP11P59045 1033 aaKnown RBP10.16□□□□□ -0.78
NUP54-207ENST00000508583 MGAT3Q09327 533 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 PAK2Q13177 524 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 PKP1Q13835 747 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 IL17AQ16552 155 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 CSPP1Q1MSJ5 1256 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 PLEKHG4Q58EX7 1191 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 FBXO47Q5MNV8 452 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 TMEM240Q5SV17 173 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 CCDC73Q6ZRK6 1079 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 ZNF365Q70YC5 407 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 LRRC71Q8N4P6 559 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 LINC01465Q8N7H1 131 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 KIFAP3Q92845 792 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 WNT8BQ93098 351 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 DRC1Q96MC2 740 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 CEP89Q96ST8 783 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms