RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 TRAPPC11Q7Z392 1133 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 CADPS2Q86UW7 1296 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 METTL16Q86W50 562 aaKnown RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 DEPDC1BQ8WUY9 529 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 RNF34Q969K3 372 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 CATSPER2Q96P56 530 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 KCNK16Q96T55 309 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 FAM192AQ9GZU8 254 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 DCLRE1BQ9H816 532 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 LGR6Q9HBX8 967 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 GGA2Q9UJY4 613 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 PNMA2Q9UL42 364 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 C15orf41Q9Y2V0 281 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ATP10DQ9P241 1426 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 SYCE1LA8MT33 242 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 GSTA4O15217 222 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 LPXNO60711 386 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 PRR29P0C7W0 189 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ABCD1P33897 745 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ALCAMQ13740 583 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 CCDC137Q6PK04 289 aaKnown RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 RSPH3Q86UC2 560 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 DDHD1Q8NEL9 900 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 PIGOQ8TEQ8 1089 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 SIRT1Q96EB6 747 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ARHGEF10LQ9HCE6 1279 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ZNF229Q9UJW7 825 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 A0A1W2PQJ5 194 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ZNF185O15231 689 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 SERPINI2O75830 405 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 SRGAP2BP0DMP2 458 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 RFX1P22670 979 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 MAP4P27816 1152 aaKnown RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ATICP31939 592 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ADD2P35612 726 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 AARSP49588 968 aaKnown RBP eCLIP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ICA1Q05084 483 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 PRPSAP1Q14558 356 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 KLC3Q6P597 504 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 RFFLQ8WZ73 363 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 CASP10Q92851 521 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 CAVIN3Q969G5 261 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 MLXIPLQ9NP71 852 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 DDX28Q9NUL7 540 aaKnown RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 RNF103-CHMP3A0A140T963 221 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 FAM47DPA6NHR8 397 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ORC4O43929 436 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ZRANB2O95218 330 aaKnown RBP eCLIP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 GFAPP14136 432 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 TMOD1P28289 359 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 MAPRE2Q15555 327 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 TPTE2Q6XPS3 522 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 MAEAQ7L5Y9 396 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 TERB1Q8NA31 727 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ATP11CQ8NB49 1132 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 DTX3LQ8TDB6 740 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 CMTM5Q96DZ9 223 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 EYA3Q99504 573 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 TMBIM4Q9HC24 238 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ZNF277Q9NRM2 450 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 UTP6Q9NYH9 597 aaKnown RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 PALM3A6NDB9 673 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 SRGNP10124 158 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 DARS2Q6PI48 645 aaKnown RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 TMCO5AQ8N6Q1 288 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ACCSQ96QU6 501 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ASCC2Q9H1I8 757 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 TRABDQ9H4I3 376 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 SUGCTQ9HAC7 445 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 UBE2TQ9NPD8 197 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 RBM12Q9NTZ6 932 aaKnown RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 PKD2L2Q9NZM6 624 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 STX18Q9P2W9 335 aaKnown RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 AMACRQ9UHK6 382 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ATP11BQ9Y2G3 1177 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 YEATS2Q9ULM3 1422 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 IQCA1LA6NCM1 817 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 TRIM49BA6NDI0 452 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 C16orf96A6NNT2 1141 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 SERPINB2P05120 415 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 UBTFL6P0CB48 400 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 PPP2R5CQ13362 524 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 SCYL2Q6P3W7 929 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 KRT26Q7Z3Y9 468 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 IL17REQ8NFR9 667 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ZKSCAN4Q969J2 545 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 MTBPQ96DY7 904 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 NSL1Q96IY1 281 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 CLMNQ96JQ2 1002 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ESYT2A0FGR8 921 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 A6NJR5 290 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 GOLGA8CPA6NN73 597 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 PHF2O75151 1096 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ITIH2P19823 946 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 IL1RL1Q01638 556 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 KYNUQ16719 465 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 ODR4Q5SWX8 454 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 KIF2BQ8N4N8 673 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 RAPGEF5Q92565 580 aa7.81□□□□□ -1.16
UBE2D3-224ENST00000508474 BTBD6Q96KE9 485 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms