RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 A0A1B0GVL5 298 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 ASAP2O43150 1006 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 EVI5O60447 810 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 PRPF40AO75400 957 aaKnown RBP22.32■■□□□ 1.16
USP53-203ENST00000507597 CD4P01730 458 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 PFKFB1P16118 471 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 PTMSP20962 102 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 IER5Q5VY09 327 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 KANK3Q6NY19 840 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 PADI6Q6TGC4 694 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 SERINC5Q86VE9 423 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 DPF3Q92784 378 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 DHX58Q96C10 678 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 TRPV6Q9H1D0 765 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 DHX33Q9H6R0 707 aaKnown RBP22.32■■□□□ 1.16
USP53-203ENST00000507597 TRMT13Q9NUP7 481 aaKnown RBP22.32■■□□□ 1.16
USP53-203ENST00000507597 TMEM39AQ9NV64 488 aa22.32■■□□□ 1.16
USP53-203ENST00000507597 HOOK1Q9UJC3 728 aaKnown RBP22.32■■□□□ 1.16
USP53-203ENST00000507597 TCHHQ07283 1943 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 ZBTB39O15060 712 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 PARNO95453 639 aaKnown RBP22.31■■□□□ 1.16
USP53-203ENST00000507597 C22orf31O95567 290 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 KRT18P05783 430 aaKnown RBP22.31■■□□□ 1.16
USP53-203ENST00000507597 CYP11B2P19099 503 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 TPRNQ4KMQ1 711 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 MARCH8Q5T0T0 291 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 RPAINQ86UA6 219 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 TRAPPC12Q8WVT3 735 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 TNMDQ9H2S6 317 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 HPSEQ9Y251 543 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 NR2E3Q9Y5X4 410 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 KAT6AQ92794 2004 aa22.31■■□□□ 1.16
USP53-203ENST00000507597 IGKV6-21A0A0C4DH24 114 aa22.3■■□□□ 1.16
USP53-203ENST00000507597 ZBTB42B2RXF5 422 aa22.3■■□□□ 1.16
USP53-203ENST00000507597 USO1O60763 962 aaKnown RBP22.3■■□□□ 1.16
USP53-203ENST00000507597 MXD4Q14582 209 aaPredicted RBP22.3■■□□□ 1.16
USP53-203ENST00000507597 EMC2Q15006 297 aa22.3■■□□□ 1.16
USP53-203ENST00000507597 PSPC1Q8WXF1 523 aaKnown RBP22.3■■□□□ 1.16
USP53-203ENST00000507597 KIFAP3Q92845 792 aa22.3■■□□□ 1.16
USP53-203ENST00000507597 AKT3Q9Y243 479 aa22.3■■□□□ 1.16
USP53-203ENST00000507597 TMEM150BA6NC51 233 aa22.29■■□□□ 1.16
USP53-203ENST00000507597 SLC12A3P55017 1021 aa22.29■■□□□ 1.16
USP53-203ENST00000507597 ZNF200P98182 395 aaPredicted RBP22.29■■□□□ 1.16
USP53-203ENST00000507597 FAAP100Q0VG06 881 aa22.29■■□□□ 1.16
USP53-203ENST00000507597 CNNM3Q8NE01 707 aa22.29■■□□□ 1.16
USP53-203ENST00000507597 DRC1Q96MC2 740 aa22.29■■□□□ 1.16
USP53-203ENST00000507597 SH2D3AQ9BRG2 576 aa22.29■■□□□ 1.16
USP53-203ENST00000507597 BLOC1S4Q9NUP1 217 aa22.29■■□□□ 1.16
USP53-203ENST00000507597 LOXHD1Q8IVV2 1947 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 A0A087WWV3 80 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 PITPNM1O00562 1244 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 MYL1P05976 194 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 SLFN14P0C7P3 912 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 GUCY2CP25092 1073 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 NDUFA8P51970 172 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 FAM160A1Q05DH4 1040 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 TFDP1Q14186 410 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 DHX8Q14562 1220 aaKnown RBP22.28■■□□□ 1.16
USP53-203ENST00000507597 MCM6Q14566 821 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 PPP2R5AQ15172 486 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 RINT1Q6NUQ1 792 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 KCNK18Q7Z418 384 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 GPBP1Q86WP2 473 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 PPP1R13LQ8WUF5 828 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 IFT74Q96LB3 600 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 CEP89Q96ST8 783 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 FAM49AQ9H0Q0 323 aaPredicted RBP22.28■■□□□ 1.16
USP53-203ENST00000507597 HIPK3Q9H422 1215 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 C17orf75Q9HAS0 396 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 SUCLA2Q9P2R7 463 aaPredicted RBP22.28■■□□□ 1.16
USP53-203ENST00000507597 ODF2LQ9ULJ1 636 aa22.28■■□□□ 1.16
USP53-203ENST00000507597 ZNF202O95125 648 aa22.27■■□□□ 1.16
USP53-203ENST00000507597 RAG1P15918 1043 aa22.27■■□□□ 1.16
USP53-203ENST00000507597 THPOP40225 353 aa22.27■■□□□ 1.16
USP53-203ENST00000507597 RBL2Q08999 1139 aa22.27■■□□□ 1.16
USP53-203ENST00000507597 ODR4Q5SWX8 454 aa22.27■■□□□ 1.16
USP53-203ENST00000507597 FAM102BQ5T8I3 360 aa22.27■■□□□ 1.16
USP53-203ENST00000507597 FAM43BQ6ZT52 329 aaPredicted RBP22.27■■□□□ 1.16
USP53-203ENST00000507597 DNAJB3Q8WWF6 145 aa22.27■■□□□ 1.16
USP53-203ENST00000507597 INO80BQ9C086 356 aaPredicted RBP22.27■■□□□ 1.16
USP53-203ENST00000507597 PRDM5Q9NQX1 630 aaPredicted RBP22.27■■□□□ 1.16
USP53-203ENST00000507597 PDLIM7Q9NR12 457 aa22.27■■□□□ 1.16
USP53-203ENST00000507597 WDR81Q562E7 1941 aa22.27■■□□□ 1.16
USP53-203ENST00000507597 KINO60870 393 aaKnown RBP22.26■■□□□ 1.15
USP53-203ENST00000507597 RGS19P49795 217 aa22.26■■□□□ 1.15
USP53-203ENST00000507597 CLCN3P51790 818 aa22.26■■□□□ 1.15
USP53-203ENST00000507597 E2F4Q16254 413 aa22.26■■□□□ 1.15
USP53-203ENST00000507597 C1orf186Q6ZWK4 172 aa22.26■■□□□ 1.15
USP53-203ENST00000507597 KIAA0319LQ8IZA0 1049 aa22.26■■□□□ 1.15
USP53-203ENST00000507597 LRRC71Q8N4P6 559 aa22.26■■□□□ 1.15
USP53-203ENST00000507597 CCDC47Q96A33 483 aaKnown RBP22.26■■□□□ 1.15
USP53-203ENST00000507597 TIGD1Q96MW7 591 aa22.26■■□□□ 1.15
USP53-203ENST00000507597 SCLT1Q96NL6 688 aa22.26■■□□□ 1.15
USP53-203ENST00000507597 KBTBD4Q9NVX7 518 aa22.26■■□□□ 1.15
USP53-203ENST00000507597 A0A087X0B3 334 aa22.25■■□□□ 1.15
USP53-203ENST00000507597 KIAA0355O15063 1070 aa22.25■■□□□ 1.15
USP53-203ENST00000507597 TBCAO75347 108 aaKnown RBP22.25■■□□□ 1.15
USP53-203ENST00000507597 HIC1Q14526 733 aa22.25■■□□□ 1.15
USP53-203ENST00000507597 NAALADL2Q58DX5 795 aa22.25■■□□□ 1.15
USP53-203ENST00000507597 ZNF410Q86VK4 478 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms