RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 HIBADHP31937 336 aaKnown RBP7.06□□□□□ -1.28
LINC01088-203ENST00000507476 GTF2F1P35269 517 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC01088-203ENST00000507476 TMEM132BQ14DG7 1078 aa7.06□□□□□ -1.28
LINC01088-203ENST00000507476 FNDC7Q5VTL7 733 aa7.06□□□□□ -1.28
LINC01088-203ENST00000507476 SHCBP1Q8NEM2 672 aa7.06□□□□□ -1.28
LINC01088-203ENST00000507476 TMEM176AQ96HP8 235 aa7.06□□□□□ -1.28
LINC01088-203ENST00000507476 SFMBT1Q9UHJ3 866 aa7.06□□□□□ -1.28
LINC01088-203ENST00000507476 TCRBV16S1A1N1A0A5B0 115 aa7.05□□□□□ -1.28
LINC01088-203ENST00000507476 PMS2P1A4D2B8 440 aa7.05□□□□□ -1.28
LINC01088-203ENST00000507476 APEX1P27695 318 aaKnown RBP7.05□□□□□ -1.28
LINC01088-203ENST00000507476 SPTY2D1Q68D10 685 aaPredicted RBP7.05□□□□□ -1.28
LINC01088-203ENST00000507476 BRAPQ7Z569 592 aa7.05□□□□□ -1.28
LINC01088-203ENST00000507476 FGD2Q7Z6J4 655 aa7.05□□□□□ -1.28
LINC01088-203ENST00000507476 RTN4RL1Q86UN2 441 aaPredicted RBP7.05□□□□□ -1.28
LINC01088-203ENST00000507476 AMER2Q8N7J2 671 aa7.05□□□□□ -1.28
LINC01088-203ENST00000507476 JMYQ8N9B5 988 aa7.05□□□□□ -1.28
LINC01088-203ENST00000507476 FOXRED1Q96CU9 486 aaPredicted RBP7.05□□□□□ -1.28
LINC01088-203ENST00000507476 DNAJC7Q99615 494 aa7.05□□□□□ -1.28
LINC01088-203ENST00000507476 CTDP1Q9Y5B0 961 aaPredicted RBP7.05□□□□□ -1.28
LINC01088-203ENST00000507476 E9PSI1 815 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 ZBTB48P10074 688 aaPredicted RBP7.04□□□□□ -1.28
LINC01088-203ENST00000507476 MCM7P33993 719 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 RBL2Q08999 1139 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 ADAM15Q13444 863 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 SAFB2Q14151 953 aaKnown RBP eCLIP7.04□□□□□ -1.286e-7■■■□□ 15.9
LINC01088-203ENST00000507476 ADGRE4PQ86SQ3 457 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 SGMS1Q86VZ5 419 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 D2HGDHQ8N465 521 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 IGSF22Q8N9C0 903 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 CHFRQ96EP1 664 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 HIRIP3Q9BW71 556 aaPredicted RBP7.04□□□□□ -1.28
LINC01088-203ENST00000507476 TRIM8Q9BZR9 551 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 ZNF703Q9H7S9 590 aaPredicted RBP7.04□□□□□ -1.28
LINC01088-203ENST00000507476 CEP72Q9P209 647 aa7.04□□□□□ -1.28
LINC01088-203ENST00000507476 KCNQ2O43526 872 aa7.03□□□□□ -1.28
LINC01088-203ENST00000507476 STAT3P40763 770 aa7.03□□□□□ -1.28
LINC01088-203ENST00000507476 IRF9Q00978 393 aa7.03□□□□□ -1.28
LINC01088-203ENST00000507476 ALDH6A1Q02252 535 aaKnown RBP7.03□□□□□ -1.28
LINC01088-203ENST00000507476 RIN1Q13671 783 aa7.03□□□□□ -1.28
LINC01088-203ENST00000507476 TMEM177Q53S58 311 aa7.03□□□□□ -1.28
LINC01088-203ENST00000507476 CALML6Q8TD86 181 aa7.03□□□□□ -1.28
LINC01088-203ENST00000507476 ERCC4Q92889 916 aaPredicted RBP7.03□□□□□ -1.28
LINC01088-203ENST00000507476 TRIM39Q9HCM9 518 aa7.03□□□□□ -1.28
LINC01088-203ENST00000507476 SHROOM4Q9ULL8 1493 aa7.03□□□□□ -1.28
LINC01088-203ENST00000507476 HMGB1P09429 215 aaKnown RBP7.02□□□□□ -1.29
LINC01088-203ENST00000507476 HHEXQ03014 270 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 DPTQ07507 201 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 TUBA3CQ13748 450 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 ACAP1Q15027 740 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 TUBA3EQ6PEY2 450 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 OTOP1Q7RTM1 612 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 C2orf69Q8N8R5 385 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 RABGGTAQ92696 567 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 ARMC5Q96C12 935 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 MRPL4Q9BYD3 311 aaKnown RBP7.02□□□□□ -1.29
LINC01088-203ENST00000507476 IKZF4Q9H2S9 585 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 GIT1Q9Y2X7 761 aa7.02□□□□□ -1.29
LINC01088-203ENST00000507476 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 CAPN14A8MX76 684 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 HIP1RO75146 1068 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 NPTXRO95502 500 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 ATP2C1P98194 919 aaPredicted RBP7.01□□□□□ -1.29
LINC01088-203ENST00000507476 ZSWIM2Q8NEG5 633 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 NEU4Q8WWR8 484 aaPredicted RBP7.01□□□□□ -1.29
LINC01088-203ENST00000507476 FOXB1Q99853 325 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 MMRN2Q9H8L6 949 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 AURKAIP1Q9NWT8 199 aaPredicted RBP7.01□□□□□ -1.29
LINC01088-203ENST00000507476 MAGEL2Q9UJ55 1249 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 VWA7Q9Y334 891 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 SH3BP1Q9Y3L3 701 aa7.01□□□□□ -1.29
LINC01088-203ENST00000507476 WDR33Q9C0J8 1336 aaKnown RBP7.01□□□□□ -1.29
LINC01088-203ENST00000507476 APPP05067 770 aa7□□□□□ -1.29
LINC01088-203ENST00000507476 MECP2P51608 486 aaKnown RBP7□□□□□ -1.29
LINC01088-203ENST00000507476 ADCY7P51828 1080 aa7□□□□□ -1.29
LINC01088-203ENST00000507476 MAP3K12Q12852 859 aa7□□□□□ -1.29
LINC01088-203ENST00000507476 CC2D1AQ6P1N0 951 aaPredicted RBP7□□□□□ -1.29
LINC01088-203ENST00000507476 C8orf37Q96NL8 207 aa7□□□□□ -1.29
LINC01088-203ENST00000507476 SRPK1Q96SB4 655 aaKnown RBP7□□□□□ -1.29
LINC01088-203ENST00000507476 BOCQ9BWV1 1114 aa7□□□□□ -1.29
LINC01088-203ENST00000507476 DVL2O14641 736 aa6.99□□□□□ -1.29
LINC01088-203ENST00000507476 ANTXR2P58335 489 aa6.99□□□□□ -1.29
LINC01088-203ENST00000507476 ADAM8P78325 824 aa6.99□□□□□ -1.29
LINC01088-203ENST00000507476 KLHDC10Q6PID8 442 aa6.99□□□□□ -1.29
LINC01088-203ENST00000507476 TMPRSS6Q8IU80 811 aa6.99□□□□□ -1.29
LINC01088-203ENST00000507476 THEMISQ8N1K5 641 aaPredicted RBP6.99□□□□□ -1.29
LINC01088-203ENST00000507476 ZNF483Q8TF39 744 aaPredicted RBP6.99□□□□□ -1.29
LINC01088-203ENST00000507476 THAP3Q8WTV1 239 aaPredicted RBP6.99□□□□□ -1.29
LINC01088-203ENST00000507476 LARP4BQ92615 738 aaKnown RBP6.99□□□□□ -1.29
LINC01088-203ENST00000507476 CEP89Q96ST8 783 aa6.99□□□□□ -1.29
LINC01088-203ENST00000507476 C11orf21Q9P2W6 132 aa6.99□□□□□ -1.29
LINC01088-203ENST00000507476 CCDC163A0A0D9SF12 145 aa6.98□□□□□ -1.29
LINC01088-203ENST00000507476 A0A1W2PRX2 142 aa6.98□□□□□ -1.29
LINC01088-203ENST00000507476 C2orf78A6NCI8 922 aa6.98□□□□□ -1.29
LINC01088-203ENST00000507476 PRLP01236 227 aa6.98□□□□□ -1.29
LINC01088-203ENST00000507476 RGS3P49796 1198 aa6.98□□□□□ -1.29
LINC01088-203ENST00000507476 RRP1BQ14684 758 aaKnown RBP6.98□□□□□ -1.29
LINC01088-203ENST00000507476 LDLRAD3Q86YD5 345 aa6.98□□□□□ -1.29
LINC01088-203ENST00000507476 LPPQ93052 612 aa6.98□□□□□ -1.29
LINC01088-203ENST00000507476 GPHA2Q96T91 129 aa6.98□□□□□ -1.29
LINC01088-203ENST00000507476 MPHOSPH9Q99550 1183 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms